Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1885 |
Symbol | |
ID | 9156035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1970711 |
End bp | 1971535 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003646837 |
Protein GI | 296139594 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.838043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCCTCG GCCGCCGCAA GTCCGGCAAG CAGCGCAGCG ACGCCGGCGT CGATCCGTAC GCCTCGATCG GACAGCCCGA GCATCACGCG ATTCCGACGC CCGCGCCTGA TGAGGCGGCG CAGACCCTCG GCTCCGGCGA GGGCCCGTAC GACCTCGCGC TGCTCGAGGA CATCGAGGGG CTTGAGGACG GCCGGCTCGA CCTCGGCTCC CTCGTTCTGG CGATGCCGCC GGAGGCGCAG CTCCAGGTCG AGATGAGCCC CGAGGGCCAG CCCGTCGGTG TCCACCTCGA CACCCCGGCC GGCCGGATCA CGCCCGGCGT CTTCGCCGCC CCCAAGACCG GCGGCCAGTG GCGCGAGGTG GTCACCGAGC TCGCGGACTC ACTGCGCGAG AACGGCGCCC AGGTCACCAT CGAGGACGGT CACTGGGGCC GCGAGGTGGT CGGTATCCAG CCCGACGGTG TACTCCGGTT CATCGGCGTC GACGGTCCGC GATGGATGAT CAGGTTCGTC GTCGCCGCCC CCGCCGAGGC CGCAGAGCAG GCGGCGCAGC TGGCACGCGC CATGCTCGCG GAGACCGTGG TGCGTCGCGG CACCGACCCG CGTCCCGCGC GCGATCACCT CGAGATCGAG CTGCCCAGCG AGCTCGTCGC CCAGCTGCAG CAGGCGATGG CGCAACAGGC GCAGCAGCAG GAGCAGGCCG CGGCATCGAT CGCGCAGCAG GTCGCGCAGC GTGCCGCCGC CGAGGGCCCG GAGGCGCTGC GGCAGAGCAA CCAGGACCGC CTCACCCGCG GTTCCGCGCT CTCGCGCCTC AAGCACCAGG ACTGA
|
Protein sequence | MALGRRKSGK QRSDAGVDPY ASIGQPEHHA IPTPAPDEAA QTLGSGEGPY DLALLEDIEG LEDGRLDLGS LVLAMPPEAQ LQVEMSPEGQ PVGVHLDTPA GRITPGVFAA PKTGGQWREV VTELADSLRE NGAQVTIEDG HWGREVVGIQ PDGVLRFIGV DGPRWMIRFV VAAPAEAAEQ AAQLARAMLA ETVVRRGTDP RPARDHLEIE LPSELVAQLQ QAMAQQAQQQ EQAAASIAQQ VAQRAAAEGP EALRQSNQDR LTRGSALSRL KHQD
|
| |