Gene Tpau_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1885 
Symbol 
ID9156035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1970711 
End bp1971535 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003646837 
Protein GI296139594 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.838043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCTCG GCCGCCGCAA GTCCGGCAAG CAGCGCAGCG ACGCCGGCGT CGATCCGTAC 
GCCTCGATCG GACAGCCCGA GCATCACGCG ATTCCGACGC CCGCGCCTGA TGAGGCGGCG
CAGACCCTCG GCTCCGGCGA GGGCCCGTAC GACCTCGCGC TGCTCGAGGA CATCGAGGGG
CTTGAGGACG GCCGGCTCGA CCTCGGCTCC CTCGTTCTGG CGATGCCGCC GGAGGCGCAG
CTCCAGGTCG AGATGAGCCC CGAGGGCCAG CCCGTCGGTG TCCACCTCGA CACCCCGGCC
GGCCGGATCA CGCCCGGCGT CTTCGCCGCC CCCAAGACCG GCGGCCAGTG GCGCGAGGTG
GTCACCGAGC TCGCGGACTC ACTGCGCGAG AACGGCGCCC AGGTCACCAT CGAGGACGGT
CACTGGGGCC GCGAGGTGGT CGGTATCCAG CCCGACGGTG TACTCCGGTT CATCGGCGTC
GACGGTCCGC GATGGATGAT CAGGTTCGTC GTCGCCGCCC CCGCCGAGGC CGCAGAGCAG
GCGGCGCAGC TGGCACGCGC CATGCTCGCG GAGACCGTGG TGCGTCGCGG CACCGACCCG
CGTCCCGCGC GCGATCACCT CGAGATCGAG CTGCCCAGCG AGCTCGTCGC CCAGCTGCAG
CAGGCGATGG CGCAACAGGC GCAGCAGCAG GAGCAGGCCG CGGCATCGAT CGCGCAGCAG
GTCGCGCAGC GTGCCGCCGC CGAGGGCCCG GAGGCGCTGC GGCAGAGCAA CCAGGACCGC
CTCACCCGCG GTTCCGCGCT CTCGCGCCTC AAGCACCAGG ACTGA
 
Protein sequence
MALGRRKSGK QRSDAGVDPY ASIGQPEHHA IPTPAPDEAA QTLGSGEGPY DLALLEDIEG 
LEDGRLDLGS LVLAMPPEAQ LQVEMSPEGQ PVGVHLDTPA GRITPGVFAA PKTGGQWREV
VTELADSLRE NGAQVTIEDG HWGREVVGIQ PDGVLRFIGV DGPRWMIRFV VAAPAEAAEQ
AAQLARAMLA ETVVRRGTDP RPARDHLEIE LPSELVAQLQ QAMAQQAQQQ EQAAASIAQQ
VAQRAAAEGP EALRQSNQDR LTRGSALSRL KHQD