| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1878 |
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| Symbol | |
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| ID | 9156028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 1965002 |
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| End bp | 1966453 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003646830 |
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| Protein GI | 296139587 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.230521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGCGA CGCAGACCAG CTCCAGCGCG CAGTCGGCAG ACGGCGCGGA CGGTTCGGCC
ACCTCGGCGG AGACCCCCGC CAAGAAGACC ACCGCCAAGA AGGCACCAGC GAAGAAGGCG
GCGGCCAAGA AGGCTCCCGC CAAGGCCGCG GCGAAGAAGG CTCCCGCCAA GGCCGCGGCG
AAGAAGGCTC CCGCTAAGAA GGCTCCGGCC AAGCGCACGG CGAAGAAGGC CGCGGGCAAG
AAGGACGCCT CGGCGGCGAA CCCCGAGGAC GGCGCGATCG AGGAGGAGGA CGTCGAGCTC
GACGGCGATC CCGATCCCAC CGAGCTCTCC GACGAGGACG TCACGATCGA CTCCGACGAC
ACCGCGGACG ATGTCTCGGA TTCGAAGGCC AAGAGCGCCG TCACCAAGCC CGCCCCCGCG
GACGCCGAGG ACGACGAGCC CTCCGAACAG GACAAGGCCT CGGGCGATTT CGTCTGGGAC
GAGGAGGAGT CGGAGGCGTT GCGGCAGGCC CGCAAGGACG CCGAGCTGAC CGCCTCGGCC
GACTCTGTGC GCGCGTACCT CAAGCAGATC GGTAAGGTCG CGCTGCTCAA CGCCGAGGAG
GAGGTCGAGC TCGCCAAGCG GATCGAGGCC GGCCTGTTCG CCGAGCAGAT GATCAACCGC
TGGGTCGAGC GCGGCGAGAA GCCGGCGATC GGCATCCGGC GCGATATGAA CTGGATCGCC
CGCGACGGCA ACCGGGCCAA GAACCACCTG CTCGAGGCCA ACCTCCGGCT CGTGGTCTCG
CTGGCCAAGC GCTACACCGG CCGCGGCATG GCCTTCCTGG ACCTGATCCA GGAGGGCAAC
CTGGGCCTGA TCCGCGCGGT GGAGAAGTTC GACTACACCA AGGGCTACAA GTTCTCGACG
TACGCCACCT GGTGGATCCG GCAGGCGATC ACCCGCGCGA TGGCCGACCA GGCCCGCACC
ATCCGCATCC CGGTGCACAT GGTTGAGGTC ATCAACAAGC TCGGCCGCAT CCAGCGCGAG
TTGCTCCAGG ACCTGGGCCG CGAGCCCACG CCGGAGGAAC TGGCCAAGGA GATGGACATC
ACGCCCGAGA AGGTGCTGGA GATCCAGCAG TACGCGCGTG AGCCGATCTC GCTGGATCAG
ACGATCGGCG ACGAGGGTGA CAGCCAGCTC GGCGACTTCA TCGAGGACTC CGAGGCCGTG
GTGGCCGTCG ATGCGGTGTC GTTCACCCTG CTGCAGGACC AGCTCCAGTC CGTTCTCGAC
ACGCTGTCCG AGCGCGAGGC CGGTGTCGTC CGCCTGCGGT TCGGTCTCAC CGACGGTCAG
CCGCGCACGC TGGACGAGAT CGGCCAGGTC TACGGCGTGA CGCGCGAGCG GATCCGCCAG
ATCGAGTCGA AGACGATGAG CAAGCTGCGG CATCCGTCAC GCTCGCAGGT CCTGCGCGAC
TACCTGGACT AG
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| Protein sequence | MAATQTSSSA QSADGADGSA TSAETPAKKT TAKKAPAKKA AAKKAPAKAA AKKAPAKAAA
KKAPAKKAPA KRTAKKAAGK KDASAANPED GAIEEEDVEL DGDPDPTELS DEDVTIDSDD
TADDVSDSKA KSAVTKPAPA DAEDDEPSEQ DKASGDFVWD EEESEALRQA RKDAELTASA
DSVRAYLKQI GKVALLNAEE EVELAKRIEA GLFAEQMINR WVERGEKPAI GIRRDMNWIA
RDGNRAKNHL LEANLRLVVS LAKRYTGRGM AFLDLIQEGN LGLIRAVEKF DYTKGYKFST
YATWWIRQAI TRAMADQART IRIPVHMVEV INKLGRIQRE LLQDLGREPT PEELAKEMDI
TPEKVLEIQQ YAREPISLDQ TIGDEGDSQL GDFIEDSEAV VAVDAVSFTL LQDQLQSVLD
TLSEREAGVV RLRFGLTDGQ PRTLDEIGQV YGVTRERIRQ IESKTMSKLR HPSRSQVLRD
YLD
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