| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1871 |
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| Symbol | |
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| ID | 9156021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 1955463 |
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| End bp | 1957160 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | transposase |
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| Protein accession | YP_003646823 |
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| Protein GI | 296139580 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.333339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGGAT CGAAGGTGGA GCTGTTCGCG CAGATTCGGC GGGATGCCCG GGTCGAGGGC
ATGAGTATCC GGGCGTTAGC CCGGAAACAT GGTGTGCATC GTCGGACGGT GCGGCAGGCG
TTGTCGTCGG CGGAGCCGCC GCCGCGGAAG ACGCCGGAGC GGTCATCGCC GCGGTTGGAT
CCGTTCAAGG CGGCGATCGA TGCGATGCTG CGGTCGGATC TTCAGGCTCC TCGGAAGCAG
CGGCATACGG CGACGCGGAT CCGGGAACGT TTGGCGATCG AGCACGGCGC GGTCGAGTTG
TCGTATTCGA CGGTGCGGGA CTACGTGCGG GTTCGGCGGG CGCAGATCGA GGTGGAGGCC
GGACGGCGCA CGGAGGTGTT CATCGCTCAG GATCACGCGC CGGGTGCGGA GGCGGAGGTC
GACTTCGGCG AGGTTTGGGT GATCCTGAAC GGGGTCAAGA CCAAGTGCCA CATGTTCGTC
TACCGGCTCT CGCATTCGGG CAAGGCCATT CACCGGGTCT ATCCGATCGG CGGGCAGGAA
GCGTTCCTCG AAGGACACGT GGAGGCGTTC CGCGAGCTCG GTGGGGTCCC GACCCGGCAC
ATCCGCTACG ACAACCTGAC CTCGGCGGTG GTCGCGGTGC TGCAGGGCGG GGACCGGCGC
CGGCAGGAGA ACCCGCGCTG GACGTTGTTT CACTCGCACT ACGGGTTCGA TCCGTTCTAC
TGCCAGCCTG GTATCGCCGG GGCGCATGAG AAGGGTGGCG TTGAGGGCGA GGTCGGTTGG
TTTCGCCGCA ACCGTTTGAC CCCGATGCCG CAGGTGGAGT CCCTTGATGA GCTCAACGAG
CAGATCAAAA CTTGGGAAGC GCGCGATGAG GGCCGGCGTA TCGACGGCCG ACTGCGGACC
GTCGGCCAGG ACTACCAGCA CGACCGGGCT GCGCTGGCTC CGTTGCCGGT GGAGGATTTC
GACCCTGGTC TGGTCCTCAC ACCGCGGGTG GACCGCTCGG CGATGATCAC CGTTCGGATG
GTCCGCTACT CGGTGCCGGC GCATCTGATC GGCCGCCGAG TCCGCGTCTC CCTGCAGGCC
TCTCAGCTGC TGGTCTACGA CGGCCGCGCC CTAGTCGCGC GGCACCAGCG CGTCGCCGGC
CGCGGTATCG CGAAGGTCGA CCTCGACCAC TACCTCGAGG TTCTCAAGTT CAAACCCGGC
GCCCTGCCGG GATCAACAGC GTTGGCTCAA GCCCGCGCAG CGGGGGTGTT CACCGCCAGC
CACGACGCGT TCTGGGCCGC AGCCCGAAGA GTGAACGGTG ACGTCGACGG CACCAGCGAG
CTGATCGACG TGCTGCTCTT GCACCGCAGC CTGCCCGCGG ACGCGGTGAC TGCCGGCATC
GACGCTGCAT TGCGGGTCGG GGCGGTGACC GTCGAGGTGG TCGCGGTGGA GGCCCGCCGC
GCAGACGCAG CACTGCTGAC CACTAGCGAC ATGACGGGTG GGGCCAGCTC GGGTCGTCAT
CGCGTTCGCC ACGCTGATCG GCGTGAGCAA CGAGTTGTCA GCCTCACCCA ACGACGCCTC
GCAGACCCGG CCGCGGTGAT CGCCGGCCTC CCACCTGACC GACGGCCACT ACCGACGGTC
GCCGCCTACG ACCGGCTCCT CCGTCGGCGC ACCGCCTCAG ACGCTCCACC ACCACCGACT
CCGGAAAGGC ACCCATGA
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| Protein sequence | MMGSKVELFA QIRRDARVEG MSIRALARKH GVHRRTVRQA LSSAEPPPRK TPERSSPRLD
PFKAAIDAML RSDLQAPRKQ RHTATRIRER LAIEHGAVEL SYSTVRDYVR VRRAQIEVEA
GRRTEVFIAQ DHAPGAEAEV DFGEVWVILN GVKTKCHMFV YRLSHSGKAI HRVYPIGGQE
AFLEGHVEAF RELGGVPTRH IRYDNLTSAV VAVLQGGDRR RQENPRWTLF HSHYGFDPFY
CQPGIAGAHE KGGVEGEVGW FRRNRLTPMP QVESLDELNE QIKTWEARDE GRRIDGRLRT
VGQDYQHDRA ALAPLPVEDF DPGLVLTPRV DRSAMITVRM VRYSVPAHLI GRRVRVSLQA
SQLLVYDGRA LVARHQRVAG RGIAKVDLDH YLEVLKFKPG ALPGSTALAQ ARAAGVFTAS
HDAFWAAARR VNGDVDGTSE LIDVLLLHRS LPADAVTAGI DAALRVGAVT VEVVAVEARR
ADAALLTTSD MTGGASSGRH RVRHADRREQ RVVSLTQRRL ADPAAVIAGL PPDRRPLPTV
AAYDRLLRRR TASDAPPPPT PERHP
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