Gene Tpau_1856 details

Gene Information

• Locus tag: Tpau_1856
• ID: 9156006
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1940056
• End bp: 1940730
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 72%
• Product: HAD-superfamily hydrolase, subfamily IA, variant 3
• Protein accession: YP_003646809
• Protein GI: 296139566

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCCGTG CGGTGGACGT GGTGCTCTTC GACTACGGCG GGGTGCTCAC CACGCCGATG 
GGCGACAGCA TCCGCGCCTG GATCGCCGAC GAGGACATCG ATCCCGCGGT GTTCACCGCC 
ACCCTCAAGG CCTGGCTCGG CCGCGACGCC GCCGAGGGGA GCCCGATCCA CCGGCTGGAG 
ACAGGCGACC TGCCCGAGGA GGACTTCGAT CCGCTCTTCG CCGCGGCGCT GCGCACCCGC 
GACGGAGGAG CCGTGAATCC CGACGGCGTG CTCCGTCGGA TGTTCGCCCG GGTCGCGGCC 
GATCCCGCGA TGTGGTGTCT CGCCGAGGAT CTCCGCGCGG CGGGAGTCGC GGTGGGCGTC 
GTGTCGAACA GCTGGGGCAG CGGCAACCTG TACGACCGTG ACCGGCTCGC GGGGTTGTTC 
GGCGCGGTGA TCATCTCGGA GGAGGTGGGC CTGCGGAAGC CGGACCCCGC CATCTTCGAG 
TTGGCGCTCG ACCGGCTCGG CGTCCCGCCC GGCCGCGCGG CCTTCCTCGA CGACGCCGTC 
CCCAACGTCG AGGGCGCGGC CGCCCTCGGA CTGCACGCCG TGCACCACAC CGACGCCCGC 
ACCACCCGCG AGGCCCTGGC CACCCTGATC CCCGGCCTCG CAACCGAACC CACATCCGAA 
AAGGAGAACG TATGA 

 

Protein sequence

MSRAVDVVLF DYGGVLTTPM GDSIRAWIAD EDIDPAVFTA TLKAWLGRDA AEGSPIHRLE 
TGDLPEEDFD PLFAAALRTR DGGAVNPDGV LRRMFARVAA DPAMWCLAED LRAAGVAVGV 
VSNSWGSGNL YDRDRLAGLF GAVIISEEVG LRKPDPAIFE LALDRLGVPP GRAAFLDDAV 
PNVEGAAALG LHAVHHTDAR TTREALATLI PGLATEPTSE KENV