| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1839 |
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| Symbol | |
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| ID | 9155989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1922434 |
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| End bp | 1924125 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | type III restriction protein res subunit |
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| Protein accession | YP_003646796 |
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| Protein GI | 296139553 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.036346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGGTT CACTTCGTGT CTGGCAGCGC CGTGCGCTCA CGAAGTACCT GACCGCGAAG
CCGCAGGACT TCCTGGCCGT GGCTACTCCG GGCGCCGGAA AGACCACGTT CGCCCTGCGT
GTGGCAGCCG AGCTGTTGGC CGATCGCACC GTGGAGCGGG TCACCGTGGT CGCCCCCACT
GAGCACCTGA AGTACCAGTG GGCCGAAGCG GCCGCGCGGA ACGGCATCAA CCTCGACCCG
AACTTCACCA ATTCGGGCGG CAGCACTTCG TCCGACTTCG ACGGTGTCGT GATCACCTAC
GCACAGGTGG GGATGCACCC GTACAAGCAC CACGCGCGCA CCACCGCCTA CAAGACCCTG
GTGATCCTTG ATGAGATCCA CCACGCCGGT GACGCGAAGA GCTGGGGCGA GGGCGTGCGC
GAGGCCTTCG AGGGTGCGAC CCGCCGTCTG GCGCTCACCG GCACCCCGTT CCGCAGCGAC
GACAACCCGA TCCCGTTCGT CACCTACGAG CCGGAGTTCG GCGGGGGACA GCGGTCGAAG
GCCGACCACG TCTACGGCTA TTCCGACGCA CTCGCCGACG GCGTGGTGCG GCCTGTGGTC
TTCCTCGCCT ACTCGGGCCA GGCGAGCTGG CGCACCAGCG CCGGTGAGGA ATTCACCGCC
CGCCTCGGCG AACCGCTGAG TAAGGAGCAG ACCGCCCGGG CGTGGCGCAC GGCGCTCGAC
CCGCACGGCG ATTGGATCCC CGCCGTGCTG CACGCCGCGA ACACCCGTCT CGATCAGCTG
CGCCGGACGA TGCCCGATGC CGGCGGCCTG GTGATCGCGA CCGATCAGAG CACCGCCCGC
GACTACGCCG AGCTGCTGCA CGACATCACC GGCGAGAAGG TCACGGTGGT GCTGTCCGAC
GATCCGACCG CCTCGAAACG GATCAGCGAG TTCTCGTCGA GCCGGGACAA GTGGATGGTC
GCGGTGCGGA TGGTGTCCGA GGGCGTCGAT GTTCCGCGTC TCGCGGTGGG TGTGTACGCC
ACCAGCGCCT CGACGCCGCT GTTCTTCGCG CAGGCGATCG GCCGCTTCGT CCGGTCGCGC
GCGCAGGGCG AGACCGCCAG CGTGTTCCTG CCCTCGGTCC CGGTTCTGCT CGACCTCGCG
TCGAAGCTGG AGGAACAGCG TGACCACGTC CTGGGCAAGC CGCATCGCGA GTCCGACGGG
CTCGACGACG CGCTGCTGAT CGACGCGAAC AAGCAGAAGG ACGAGCCCGG CGAGGAGGAG
AAGGCCTTCG TCTCACTGCA CGCCGACGCC GAACTCGACC AACTCATCTA CGACGGATCG
TCCTACGGGA CCGCAACCTT CGCGGGCAGC GACGAGGAGG CCGACTACCT GGGGCTGCCC
GGCCTGCTCG ATGCGGAGCA GATGCGGGCG TTGCTCAAAC AGCGGCAGAA GGAACAGGTG
CAGACCCGCA CCGTCGAGGC CGAGCGGCCG GCTCCGCCGG TCGAGGTCGA ACAGCGGGCC
ACCGCCGGTG AGCAGTTGTC GGCGTTGCGT CGCGAGCTGA ACTCGCTGGT CGCCATGCAT
CATCACCGCA CCGGCAAGCC ACACGGTGTG GTCCACAACG AGCTGCGCAG CCGCCTGGGC
GGCCCGGTCA CTGCGATGGC GTCCGCCGAG CAACTGCGCG AGCGGATCGC CGCTCTGCGC
ACCTGGCGCT AG
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| Protein sequence | MAGSLRVWQR RALTKYLTAK PQDFLAVATP GAGKTTFALR VAAELLADRT VERVTVVAPT
EHLKYQWAEA AARNGINLDP NFTNSGGSTS SDFDGVVITY AQVGMHPYKH HARTTAYKTL
VILDEIHHAG DAKSWGEGVR EAFEGATRRL ALTGTPFRSD DNPIPFVTYE PEFGGGQRSK
ADHVYGYSDA LADGVVRPVV FLAYSGQASW RTSAGEEFTA RLGEPLSKEQ TARAWRTALD
PHGDWIPAVL HAANTRLDQL RRTMPDAGGL VIATDQSTAR DYAELLHDIT GEKVTVVLSD
DPTASKRISE FSSSRDKWMV AVRMVSEGVD VPRLAVGVYA TSASTPLFFA QAIGRFVRSR
AQGETASVFL PSVPVLLDLA SKLEEQRDHV LGKPHRESDG LDDALLIDAN KQKDEPGEEE
KAFVSLHADA ELDQLIYDGS SYGTATFAGS DEEADYLGLP GLLDAEQMRA LLKQRQKEQV
QTRTVEAERP APPVEVEQRA TAGEQLSALR RELNSLVAMH HHRTGKPHGV VHNELRSRLG
GPVTAMASAE QLRERIAALR TWR
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