| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1833 |
|---|
| Symbol | |
|---|
| ID | 9155983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1915099 |
|---|
| End bp | 1917810 |
|---|
| Gene Length | 2712 bp |
|---|
| Protein Length | 903 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | CoA-binding domain protein |
|---|
| Protein accession | YP_003646790 |
|---|
| Protein GI | 296139547 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.415665 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGACG AGCAGCCGTT GCATCCGTCT GGGCCCTCGA CCGATCCCTT CCCGGCGCCG
GGCGCACAGG CGCCGTCGGG TCCGTACGAG TTCCCCGCGC ACTGGGTGGC CGATGTGCTC
GCCTCCGACG GCGGCGTGGT GCACCTGCGT CCCGTGGTGC CCGACGACGC CGACGCCATG
GTCGAATTCC ACGGCGGCCT CTCCGAGCGC ACCCGGTACC TACGCTACTT CGGCCCGTAT
CCCGTGATGC CGCCGCGCGA TGTCGCGCGG ATGACCACCG TCGATCACGA GCAACGCGTG
TGCCTGCTCG CCATCCTCGG CGGCAAGATC ATCGCCGTCG GTCTGTACGA GGGTCTCGCC
GACTCCGGTA AGCCGACCTC CGCGGAGGTG GCCTTCGTGG TCGCCGACGA GCACCAGGGC
CGCGGGCTGG GTCCGATCCT GCTCGAACAT CTCGCGGGTG CCGCCGCCGA GAACGGCTTC
CACCGGTTCG AGGCCGAGGT GCTGGCCGAG AACCGGTACA TGGTCAACGT CTTCAAGGCC
GCGGGCTACG AGCTACGGCG CAGCTTCGAC GGCAGCGTCG TGCACGTCGA ATTCGGCATC
GACCCCACCG AGGCGCTGGT CGCCGTCCGT AACGCCCGCG AACTGGCGTC CGAGGCGCGC
AGCGTCAGCA ATGCGTTGCG GCCCACGTCG ATCGCCGTGA TCGGCGCCTC CGCCACACCG
GGAAAGGTCG GCCACGCGGT GCTGCGCAAC ATCATCGCCG GCGACTTCGC GGGGCCGGTC
TATCCGGTGC ACCCCGAACG CCGCTCGGTG GCGGGGATCC GTGCCTACGA GTCGGTGCGC
GATATCCCCG ATCGGGTGGA TCTCGCCGTG GTCGCCGTGC CCGCGGACAA TATGGGGCAG
GTACTCGACG ACTGCCTCGC CAAGGAGGTG CGGACCCTGC TGGTGGTCTC GTCCGGCTTC
TCCGACGCCG GTGGCCGTGG CAAGGAATCC GAACGACGGC TGCTCAAAGC GGTGCGCTCG
CACGGGATGC GGTTGATCGG GCCGAATGCG CTCGGCGTGG TCAACACCGA CCGGGAGGTG
CGGCTCAACG CCACGCTCGC CCCCGTCGTA CCGGGCCGCG GCAATGTCGG CTTCTTCTGC
CAGTCCGGTG CGCTCGGCAT CGCCATCCTG GACACCGCCG CCAAACGCGG TGTCGGACTG
ACCACTTTTG TCTCCGCCGG CAACCGGGCC GATGTCTCGG GTAACGACGT GTTGCAGTAC
TGGGACACCG ACGACGACAC CGAAGTGGTG CTGCTCTACC TGGAGAGTTT CGGCAATCCC
CGTAAGTTCG GCAGGATCGC GCGCCGGCTG GCTCGGCAGA AGCCGATCGT GGCAGTGCAT
CGCGGCGGCG TCGATGCCGA CCGGCGTCAA CGAGGATCGG ATGCCTTGTT CGAGAACTCC
GGTGTGGTGC AGGTCGATTC GATCCCCGAG CTGTTCGACT GCGCGACCTT CTTCAGCTAC
CAGCCGTTGC CCACCGGTCC ACGGGTGGCG GTCATCGGCA ATTCCACCGC GCTGGGGGTG
CTCGCGACCC ATACCGGGAT CCGTGCCGGA CTTGACGTGG CTCAGCCGGT CGACTTGGGC
GCCGCCGCCA CCCCACAGGA GTTCGGTGCC GCGATCGACG CCGCCCTCGC CGACGACACG
GTCGACGCCA TCATCGCGGT CTTCGTCCCG CCGGTGGAGG CGCCGCCCGA GGCGCACGCC
GCGGTGCTCC TGGAGGCCTC GCGCAAGCAG ATCAAACCGA TCGTGTCGAC GTTCCTCGCG
TTCGACGGCG TCACCGAGTT GCTCGCGGCC ACCGACGCCG AGGGCGTGCG TACGCGCGGT
TCGGTCCCGT CCTACCCGGA GCCGGAGCGA GCCGCCCGGG TGCTCGCACA CGGTTGGCGG
TACGCCCAGT GGCGGGCACG GCCGATCTCC GAGACCGCGC GCCCGGACGG TACCGACGTC
GAGACCGCGC GCACCCGTGT GCGGGAGTGG TTGCCGCCGA ATGATTCCGG GTCCGGTCCC
GTCACGCTGG ACTTCGAGCG CAGCACCGAG CTCCTCCGTC TGTACGGCGT CGAGGTGGTC
CCCTTCGAGG TGGCCTCCAC GCCGGAGCAG GCCATGGCCG CTGCCGACCG GCTCGGTTAC
CCGGTGGCGG TGAAGGCGAT GGGAGAGCGC TGGCGCCTGC GCGCCGACCT CGCCGCGGTG
CGCCTCGATC TCACGGGACC GCAGGCTGTC GCCGACGCTT TCGGTGAGCT CGCCGGTGCG
ACCGGTGAGA CCTTGCTGCA CGTGCAGCGA ATGGCGGACA AGGGGATCGG TTGCGCCGTC
GGGTACGAGA ACGATCCGCG GATCGGCCCG CTCCTGTCCT TCGGGCTCAG TGGTGCCGTG
CCGGAGCTGC TGGGGGACCG CGCCTATCGG CTGCTGCCGC TGACCGACGC GGCGGCCCAG
GATCTGCTCA CCGCGACGAA ATCCGCGCCC CTACTCGAAG GTTTCGCCGG TGAGGCGGGA
GTCGACCGGT CGGCGCTCAT CGCCATCGTG ACCCGCATCG CGGCCCTCGC CTATGAGATT
CCGGAGATCA CATCGATCGA CTGCCAGCCG ATCCTCGCCA CTACCGACGG CGCCGCGGTG
TTGTCGTCGG TGATCCGTAT CGGGCACGCC AGCGACATGC TCACTCAACA AGCGGAACCG
CGCCGGCTGT AA
|
|---|
| Protein sequence | MTDEQPLHPS GPSTDPFPAP GAQAPSGPYE FPAHWVADVL ASDGGVVHLR PVVPDDADAM
VEFHGGLSER TRYLRYFGPY PVMPPRDVAR MTTVDHEQRV CLLAILGGKI IAVGLYEGLA
DSGKPTSAEV AFVVADEHQG RGLGPILLEH LAGAAAENGF HRFEAEVLAE NRYMVNVFKA
AGYELRRSFD GSVVHVEFGI DPTEALVAVR NARELASEAR SVSNALRPTS IAVIGASATP
GKVGHAVLRN IIAGDFAGPV YPVHPERRSV AGIRAYESVR DIPDRVDLAV VAVPADNMGQ
VLDDCLAKEV RTLLVVSSGF SDAGGRGKES ERRLLKAVRS HGMRLIGPNA LGVVNTDREV
RLNATLAPVV PGRGNVGFFC QSGALGIAIL DTAAKRGVGL TTFVSAGNRA DVSGNDVLQY
WDTDDDTEVV LLYLESFGNP RKFGRIARRL ARQKPIVAVH RGGVDADRRQ RGSDALFENS
GVVQVDSIPE LFDCATFFSY QPLPTGPRVA VIGNSTALGV LATHTGIRAG LDVAQPVDLG
AAATPQEFGA AIDAALADDT VDAIIAVFVP PVEAPPEAHA AVLLEASRKQ IKPIVSTFLA
FDGVTELLAA TDAEGVRTRG SVPSYPEPER AARVLAHGWR YAQWRARPIS ETARPDGTDV
ETARTRVREW LPPNDSGSGP VTLDFERSTE LLRLYGVEVV PFEVASTPEQ AMAAADRLGY
PVAVKAMGER WRLRADLAAV RLDLTGPQAV ADAFGELAGA TGETLLHVQR MADKGIGCAV
GYENDPRIGP LLSFGLSGAV PELLGDRAYR LLPLTDAAAQ DLLTATKSAP LLEGFAGEAG
VDRSALIAIV TRIAALAYEI PEITSIDCQP ILATTDGAAV LSSVIRIGHA SDMLTQQAEP
RRL
|
|---|
| |