Gene Tpau_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1823 
Symbol 
ID9155973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1904471 
End bp1905439 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content70% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003646780 
Protein GI296139537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCCCG AGGTTCTGCC CTTCCGGTCC CGTCCCTACG CGCCGGAACT GCGCTTCGCC 
GAGATCCATG GACACCAGCG CGCCTACCGC ATGGGCGGCA GCGGTCCCGT CGTCCTGCTA
CTGCACGGCA TCGCCGACAA CTCGCTGGTG TGGGAACAGG TGATGGTCCA GCTCACCGAC
CGGTACACGG TGATCGCGCC GGACCTCCTG GGGCACGGCC TCTCCGACCG TCCCCGCGCC
GACTACTCGG TGGCGGCGTT CGCGAACGGG ATGCGCGATC TGCTCTGCTA TCTCGGCGTC
GATCGCGCGT CGGTGGTGGG CCACTCCCTC GGCGGTGGTG TCGCCGGACA GTTCGCCTAC
CAGTTCCCCG ACATGGTCGA GCGGCTCGTC TTCGTCGCCC CCGGCGGCGT CGATCATGAC
GTCTCGCCTC TGCTTCGACT GCTGTCGTTG CCGTTCTCGG AGCAGGTGGT CGCACTGACC
GCTCTCCCCG GCGCGAAGCA GATACTCGGT GCCGCGCTCG ACGTGGCCGC TGCGCTCCCG
GTCCCGGCGC GGGCCGATCT CGTACAGCTA CGTCTCGCAC TCGATCGGAT GCCGAACACC
GCCTCACCCC ACGCCTTCGC GCGCACCCTC CGGTCCGTGG TCGACCTGCG TGGGCAAGTG
GTGACGATGC GCGACCGCTG CTATCTCACT GCCGAGGTGC CCACCCTGGT CGCTCGGGGC
ACAGATGATT CGATCATTCC GGCCGCGCAC GCCGAAGTGC TCCGGGCGAC GCTGCCCGCG
GCCACGGTCA CCCTGTTCGA GGGGGTCGGG CACTTCCCCA TGATGGAGGC GCCCGAGCGC
TTCCTCGAGG TGCTCACCGG ATTCCTCACC TCGACCGAGC CGGCCCGCCT GGTTCGCACG
CACCTGCGCG ACGGGCTCCG CTCGGCGGCC GGCGTGCGGA TGCCGGAGCC GGCGCAGGAG
CTGGGCTAG
 
Protein sequence
MSPEVLPFRS RPYAPELRFA EIHGHQRAYR MGGSGPVVLL LHGIADNSLV WEQVMVQLTD 
RYTVIAPDLL GHGLSDRPRA DYSVAAFANG MRDLLCYLGV DRASVVGHSL GGGVAGQFAY
QFPDMVERLV FVAPGGVDHD VSPLLRLLSL PFSEQVVALT ALPGAKQILG AALDVAAALP
VPARADLVQL RLALDRMPNT ASPHAFARTL RSVVDLRGQV VTMRDRCYLT AEVPTLVARG
TDDSIIPAAH AEVLRATLPA ATVTLFEGVG HFPMMEAPER FLEVLTGFLT STEPARLVRT
HLRDGLRSAA GVRMPEPAQE LG