| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1821 |
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| Symbol | |
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| ID | 9155971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 1900538 |
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| End bp | 1903033 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003646778 |
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| Protein GI | 296139535 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCTCT CCGACCTCCT CCCCGCCGAT CCGACGGCGG ACGCGTGCTT CGAGGCGTTC
ACCGACTGGA CCACCGACCG GGGCATCGAG CTGTACCCCG CCCAGGAGGA GGCCCTGATC
GCCGCCTGCT CCGGGGCGAA CGTGATCGTG GCGACACCCA CCGGGTCCGG AAAGTCCCTG
GTGGCCATGG GCGCACAGTT CGCCGCCCTC GCGCAGGGGC GCCGCACGTA CTACACCGCC
CCGATCAAGG CCTTGGTCAG CGAGAAGTTC TTCGCCCTGT GTGAGGTCTT CGGCACCGCC
AACGTGGGCA TGGTGACCGG CGACGCGGCC GTGAACCCGG ACGCCCCGAT CGTGTGCGCG
ACGGCCGAGA TCGTGGCGAA CCTCGCACTG CGCCAGGGCG CCGACTCCGA TATCGCCCAG
GTGGTCATGG ACGAGTTCCA CTTCTACTCC GAGCCGGACC GCGGCTGGGC GTGGCAGGTG
CCGCTCATCG AACTGCCGCG CGCGCAGTTC GTACTGATGT CCGCGACATT GGGCGACACG
TCCTTCTTCG AGGACGATCT CACGCGCCGC ACCGGACGCG AGACGGTCTT GGTCGCCGGT
GCAGAACGTC CCGTCCCGCT CCACTTCTCG TACTCCACGA TGCCGATCCA GGATCAGATC
GTTGAGCTCG TGACCACCCA CCAGGCCCCC GTGTACGTGG TGCATTTCAC CCAGCAGGCC
GCGGCCGAAC GCGCACAGGC CTTGATGTCG CTACCACTGT GCTCGAAGGA GCGGAAGGCC
GCGATCGCCG AAGCGCTCGG CGACTTCCAG TTCACCACCG GGTTCGGCAA GACCCTGTCG
CGGTTGATCC GCTCCGGCGT GGGCGTGCAT CACGCCGGCA TGCTCCCCCG TTATCGGCGG
CTGGTCGAGA AACTGGCACA GGACGGCCTG CTCACGGTGA TCTGCGGAAC CGACACCCTG
GGCGTCGGAA TCAACGTGCC GATCCGCACC GTCTACCTGA CCGGGCTCAC CAAGTACGAC
GGCACCCGCA CCCGGCACCT GCGGGCCCGC GAATTCCACC AGATCGCCGG CCGCGCAGGG
CGCGCGGGCT TCGACACCCT GGGCACGGTG GTCGTCGCGG CACCGGAGCA CGAAATCGAG
AATGCCAGGC TGGAGGCGAA AGCCGCCGGG GATCCGAAGA AGCTCAAGAA GATCCAGCGC
AAGAAGCCCC CGGAGGGGTT CGTGTCCTGG GGTAAGCCGA CCTTCGACAA GCTCGTCGCC
GCCGATCCGG AGCCTCTGGT GTCCCGCTTC GCCGTGACGA ACTCCCTGCT GCTCAACGTG
ATCGCCCGAC CCCAGCCGTG CTTCGATTCG ATGCGACATC TCCTCGAGGA CAACCACGAG
ACGCGGCGCA ATCAACTGCG ACACATCCGC ACGGCGATCA CGCTCTACCG CGGGCTCGAA
GCGGGCGGCG TGGTCGAGCG GCACGGTGAA CCGGACGAGT TCGGCCGGTA CGCGCGGCTC
ACCGTCGACC TGCAACCCGA CTTCGCCCTC AATCAGCCGC TGGCGCCGTT CGCACTCGCG
GCGCTGGAAC TGCTCGACCC CGAATCGCCC GAATACGCGC TGGACGTGAT CTCCGTGATC
GAGTCGGTGC TCGACGATCC GCGGACAGTG CTGCGCGCGC AACAGAATGC GGCCCGCGGA
GCGGCGGTCG CGGAGATGAA GGCAGACGGC ATCGATTACG ACGAGCGGAT GGCGCTGTTG
GAGGATGTCA CCTATCCGAA GCCGCTCGAC GAGCTGCTGG TGCCGGCGTT CGCGACCTAT
GCCGCCGGGC ATGCCTGGGT GACACAGTTC GAGCTCTCGC CGAAGTCGGT AGTGCGCGAG
ATGATCGAGC GGGCGATGAC CTTCAACGAC TTCGTCTCGC GCTACCAGCT CGGGCGCTCC
GAGGGCGCCG TACTGCGCTA CCTCTCCGAC GCCTACCGCA CGCTGCGGCA CACCGTGCCC
GAGAACGCCC GCACCGCCGA ACTGGAGGAC TACATCGCGT GGCTGGGCGC GCTGGTGCGG
TACGTCGATA GCTCACTCGT CGACGAGTGG GAGGAGATGA CCTCGCCGGA CCCACTGCGC
GCGCACGTGG AGGCGCCCGA ACTCACCCGG TCGGTCTCGC TCACCGACGA TGCGCGCGCG
TTCACGGTGA TGGTGCGCAA TGCGATGTTC CGGCGCGTGC AGTTGGTCGC CGAGGAGGAG
TACGACCTAC TCGACGCAAT GGACCCCGGC GTGGACTGGT ACGCGGCCTT CGACGATTAC
TACGAGGAGT ACGACGATAT CGACACGGGT CCGGGCGCTC GTGGGCCGCA CCTGTTCTCG
CTCGATACCT CGCTCCCGCG AGCCTGGAAA GTGCGGCAGA CCATCGCCGA TCCGAACGGC
GATCACGGCT GGGCGATCAC CGCGACCGTC GACCTTCCCG CGTCCGACGA ACGCGGTGAC
GTGGTGCTGG CGGACGTAGC GGTGGTCGCG GGCTGA
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| Protein sequence | MNLSDLLPAD PTADACFEAF TDWTTDRGIE LYPAQEEALI AACSGANVIV ATPTGSGKSL
VAMGAQFAAL AQGRRTYYTA PIKALVSEKF FALCEVFGTA NVGMVTGDAA VNPDAPIVCA
TAEIVANLAL RQGADSDIAQ VVMDEFHFYS EPDRGWAWQV PLIELPRAQF VLMSATLGDT
SFFEDDLTRR TGRETVLVAG AERPVPLHFS YSTMPIQDQI VELVTTHQAP VYVVHFTQQA
AAERAQALMS LPLCSKERKA AIAEALGDFQ FTTGFGKTLS RLIRSGVGVH HAGMLPRYRR
LVEKLAQDGL LTVICGTDTL GVGINVPIRT VYLTGLTKYD GTRTRHLRAR EFHQIAGRAG
RAGFDTLGTV VVAAPEHEIE NARLEAKAAG DPKKLKKIQR KKPPEGFVSW GKPTFDKLVA
ADPEPLVSRF AVTNSLLLNV IARPQPCFDS MRHLLEDNHE TRRNQLRHIR TAITLYRGLE
AGGVVERHGE PDEFGRYARL TVDLQPDFAL NQPLAPFALA ALELLDPESP EYALDVISVI
ESVLDDPRTV LRAQQNAARG AAVAEMKADG IDYDERMALL EDVTYPKPLD ELLVPAFATY
AAGHAWVTQF ELSPKSVVRE MIERAMTFND FVSRYQLGRS EGAVLRYLSD AYRTLRHTVP
ENARTAELED YIAWLGALVR YVDSSLVDEW EEMTSPDPLR AHVEAPELTR SVSLTDDARA
FTVMVRNAMF RRVQLVAEEE YDLLDAMDPG VDWYAAFDDY YEEYDDIDTG PGARGPHLFS
LDTSLPRAWK VRQTIADPNG DHGWAITATV DLPASDERGD VVLADVAVVA G
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