Gene Tpau_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1820 
Symbol 
ID9155970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1900075 
End bp1900536 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content68% 
IMG OID 
ProductPolyketide cyclase/dehydrase 
Protein accessionYP_003646777 
Protein GI296139534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGCT ACGTCGCCAC CCGCACCGTG TCCGCGAGCC CCGACCAGGT CTTCGCCGTC 
CTCACCGACC CCGACCGGCA CCAGTACACC GAACCCGGCA CCTGGGTCCG GGGCGCCGTC
GACCCCACCC CGATCGACCA TGTGGGCCAG ATGTTCTCCG TGAACATGTA TCTCGACCAG
GCCGGCGGTG ATTACGTCAT GGAGAACAAG GTCACCGATT TCGTCCCGGA CCGGACCATC
GGTTGGCTCC CCGGAACCAC GCAGGACGGC AGGTGGCAAC AGGGCGGCTG GTGGTGGCGC
TACGACCTGG CCCCGGCCGC ACACGGCACC GACGTCACGC TGACCTACGA CTGGACCGAC
ACCCCGCAGG CCTTCCGCGA CCAGATCGGT GGCATGCCAC CTTTCCCGTC CGAGTTCCTC
GACGAGTCCC TCGCCTCCCT CGACCGACAC CTGCAGGGCT GA
 
Protein sequence
MERYVATRTV SASPDQVFAV LTDPDRHQYT EPGTWVRGAV DPTPIDHVGQ MFSVNMYLDQ 
AGGDYVMENK VTDFVPDRTI GWLPGTTQDG RWQQGGWWWR YDLAPAAHGT DVTLTYDWTD
TPQAFRDQIG GMPPFPSEFL DESLASLDRH LQG