| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1811 |
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| Symbol | |
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| ID | 9155961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 1889254 |
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| End bp | 1893189 |
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| Gene Length | 3936 bp |
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| Protein Length | 1311 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_003646768 |
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| Protein GI | 296139525 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGC AGGCGAGCAC GACGGCGGCG GACGCCCCGG CCAAGCGCGA CCTGTACGCG
GCGCTCGGCA CTGCGACCGA ACCCGCGGTC ACGCTTCGCG ACGAGACCAG GCTGCGTGGA
AAGCTCAAGC GCAGCAAACC CGCCGACCTG CCGCGCATCG CGCGCGACAT CGAAGCCGCT
CGGGACAGGT ACGCCACCCG CGTCGCGGCG GTGCCGGCGA TCGTCTACCC CGAAGACCTC
CCGGTCAGCG CGCGGCGCGA AGAGATCGCG AAGGCCATCG CCGAGAACCA GGTGGTGATC
CTCGCGGGTG AGACCGGCTC GGGCAAGACC ACGCAGCTAC CGAAGATCTG CCTCGAACTC
GGGCGCGGCG TGCGCGGCAT GATCGGCCAC ACCCAGCCGC GCCGGCTGGC GGCGCGCAGC
GTGGCCGAGC GCATCGCCGA GGAGACGAAG ACCGAACTCG GCGATGCGGT GGGATACGCC
GTGCGGTTCA CCGACAAGGT CTCCCCCGCT ACCTCGGTGA AGCTGATGAC CGACGGCATC
CTGCTGCGGG AGCTGACCCG CGACCGGCTA CTACGCGATT ACGACACGCT GATCATCGAT
GAGGCGCACG AACGCAGCCT GAACATCGAC TTCATCCTCG GCTACCTCAA GCAGATCCTG
CCGCGCCGGC CCGATCTCAA GGTGATCGTC ACCTCGGCGA CCATCGAGCC CGAACGGTTC
GCCGCCCACT TCGCCGCGCC AGACGGTGCG CCGGCACCGG TCATCGAGGT CAGTGGCCGG
ACCTACCCGG TGGAGATCCG TTACCGCCCG CTCGATGAGC TCACTCCCGA GGGCGACGAT
CCCGCCGACC AGGTGACCGG CATCGTTGCC GCCGTCGACG AGCTCTCCCG GGAGGCACCC
GGTGACGTGC TCGTCTTCCT CTCCGGCGAG CGCGAGATCC GCGATGCCGC CGAGGCCCTG
TCGGCCTGCG CCCGCCCGGG AACGGAGATC CTTCCCCTCT ACGCCAGACT CTCGGCCGCG
GAGCAGCACC GGGTGTTCGC CCCGCACAGT GGACGCCGGA TCGTTCTGTC CACCAACGTC
GCCGAGACCT CACTCACCGT GCCGGGCATC AAGTACGTGG TGGATACCGG CACCGCTCGC
ATCTCCCGGT ACTCGATGCG CACCAAGGTG CAGCGGCTGC CGATCGAACC GATCTCGCAG
GCCTCGGCGC AGCAGCGGTC GGGTCGCTGT GGCCGCACCT CGGATGGCAT CGCGATTCGG
CTCTATGCCG AGGACGACTT CGACAGCCGC CCGATGTTCA CCGATCCGGA GATCCTGCGC
ACCAACCTCG CGTCGGTGGT GCTGTCGATG ACTGCGCTGG ACCTCGGTGA AGTGTCGGCC
TTCCCGTTCG TGCAGCCGCC CGACGAACGC GCCGTCCGCG ACGGTGTGGC ACTCCTCGAG
GAACTCGGCG CGCTCGAAGA CGCTCATGTG GGACACAAGC GCCTGACCCC GGTCGGGCGA
CAGCTCGCGG AGCTTCCCGT GGATCCGCGC ATGGCGCGGA TGCTGGTGGC CGCCCGGGAG
TTCGGCGTGC TTGCCGAGGT TCTCGTGATC GTGGCCGGGC TGTCCATTCA GGACGTGCGC
GAGCGGCCGG CCGAACACCG CCAGGCCGCC GACGACAAGC ATGCGCGCTT CGCCGATCCG
ACATCGGACT TCCTGTCCTA CCTGAACCTG TGGCGTCACC TGGGCGACCG TCGCGCGGAA
TTGAGTTCGA GCGCCTTCCG TCGCGAGTGC CAGCGCGAAT TCCTGCATTA CGTGCGGATC
CGCGAGTGGC AGGACTTGCA CGGCCAACTC CGGCAGATAT GCCGCGATAT GGGCTGGACA
CTCGACTCGA TCGGGCGGGA ACCGGCACCG TCGGCCGATC TGATCCATCA GGCGTTGCTC
TCCGGCCTGC TGTCCCAGAT CGGACTGCGC GAGAGCGACG GCAAGGAGTT CCTGGGGGCC
CGCAATGCCA CGTTCCTGAT CTTCCCCGCA TCGGCGCTGT ACCGGAAGCC GCCGCGGTTC
GTCATGGCCG GCGAGTTGGT CGAGACCTCC CGCTTGTTCG CACGGACCGC CGCCAAGATC
GAACCGGAGT GGGCCGAGAA GCTGGCGGGT CCACTCGCCA AACGTCAGTA CTCGCAGCCG
CATTGGTCCA CCAAGCGGGA GGCGGTGCTC GCCAAGGAAC GGGTCACCCT GTTCGGAGTG
CCGCTGGTCG CGGACCGCAC GGTGAGCTTC GGCACGGTCG ATCCGGAGGC GGCACGCGAG
ATCTTCCTGC GGCACGCCCT GGTGCAAGGT GAGTGGCGCA CCCGGCATGC CTTCTTCGCG
CGCAACCGTG CTCTGCTCGA CGACGCTTCG TACCTGGAGG ACAAGGCTCG ACGCCGCGAC
ATCGTGGTCG ACGAGGACGC GCTGTTCGAC TTCTACGACC TCCGGGTGCC CGAGGGCATC
GTCTCTTCGC GGCACTTCGA TTCCTGGTGG AAGAAGGCCT CCCGCGAGGA TCCCGGACTG
CTGGACTTCA CCGAGGACGA CCTGCTGGTG GATGGTTCCG CCGGGATCAC GGGCGAGGCC
TACCCGGCCG CGTGGTTGCA GGGCCGAATC GAAGTGCCGC TGAAGTACCG GTTCGAACCT
GGCGCCGCCG ACGACGGCGT CACCGCACGG ATCGACGTCA AAGACCTCGC GACGGTGCGT
GCCGACGGGT TCGAGTGGCT GGTACCGGCG ATGCGTGACG AGTTGGCGAC AGCGCTGATC
AAGACGCTGC CGAAGCAATT GCGGCGCGAG GTGGTCCCGG CGCCGGACTT CGCCGCGGCG
GCACTGGCCC GGCTGACACC ACGTGCCGAG CCGCTGACGG ACGGACTGGC GCGGGAACTG
ACGCAACTGT CGGGCACCGT GATCCGGCCC GACGACTTCT CCCCCGAGCA GTTGCCCGCG
CACCTGCGGG TGACCTTCGT GGTGATCGGA GACGACGGCC GCGAACTCGG CGCGGGCAAA
GACCTGACCG CGCTCAAGCG GACGCTCGGC GCCGCTGTCC AGGAGGACCT GTCCAGCCGC
GCGGGCGCGT ACGAACGCGC GCCCGCGCGC GAATGGACCG CGCAGACCCT CGGCGACGTG
CCGCGACGGA TCGACACCGA AGTGCGCGGC AGCCGGGTGA CAGGGTTCGG CTCGCTCTAT
CCCGACGGTG ACCGTGCCGG CGTGCGGGTG GTGGCGGACG AAGCCGAGCA GACACGGCTC
ATGGCCGCGG GACTCGACGT GCTGCTGGCG AATGTGCTGC CCGCCGCGCA CAAGTCGGCG
TTACAGGGAT TGAACCCGCG CGAGCGGATG GCGCTGTCGC AGAGCCCGTA CGAATCTCCG
ATGGCGCTGC TGGAGGATTG TCGCCGCCGC GCGATCGCCG ATCTGCGGGC GCAGGCGGGG
ACGGCCTGGA CCCCCGACGA GTTCACCTCG CTCGCGGCGA CGGTGCGCGC CCGGCTCGGC
GAGACGCAGC AGCAGTACCT GACCTGGGTC GCATCGGCGG TCTCGACGGC GACCGAGGTC
CGGGGGTCGA TCGGGAATCC GCCGCCGGCC GCCCGGGATG CGGCCGATGA CATCGCCGAT
CAGCTCGATT CGCTGCTGTT CCCGGGTTTC GTGGGGGCGA CGGCGGGCGT GCATCTGCGG
CATCTGCCGC GGTACATCCA GGGTGCGGCC GTCCGCTGGG CGGCCCTGCC CGCGTCGATC
GACCGTGACG ATCGCGGGAT GGCAACGCTG GATCGGGTGT ACGGCGCGCT GACGGCGAAG
CTGGATTCAC TGCCGCAGCA CCGGCGCGAT GCCGGCGTGG AACAGGTGAG CTGGCAGATC
GAGGAACTCC GGGTGAGCTT GTTCGCACAG GCGCTGGGCA CCGCGGGCTC GGTGTCGGAG
AAGAAGGTGC TGGCCGCGAT CGCGGCGCTG AGCTGA
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| Protein sequence | MTKQASTTAA DAPAKRDLYA ALGTATEPAV TLRDETRLRG KLKRSKPADL PRIARDIEAA
RDRYATRVAA VPAIVYPEDL PVSARREEIA KAIAENQVVI LAGETGSGKT TQLPKICLEL
GRGVRGMIGH TQPRRLAARS VAERIAEETK TELGDAVGYA VRFTDKVSPA TSVKLMTDGI
LLRELTRDRL LRDYDTLIID EAHERSLNID FILGYLKQIL PRRPDLKVIV TSATIEPERF
AAHFAAPDGA PAPVIEVSGR TYPVEIRYRP LDELTPEGDD PADQVTGIVA AVDELSREAP
GDVLVFLSGE REIRDAAEAL SACARPGTEI LPLYARLSAA EQHRVFAPHS GRRIVLSTNV
AETSLTVPGI KYVVDTGTAR ISRYSMRTKV QRLPIEPISQ ASAQQRSGRC GRTSDGIAIR
LYAEDDFDSR PMFTDPEILR TNLASVVLSM TALDLGEVSA FPFVQPPDER AVRDGVALLE
ELGALEDAHV GHKRLTPVGR QLAELPVDPR MARMLVAARE FGVLAEVLVI VAGLSIQDVR
ERPAEHRQAA DDKHARFADP TSDFLSYLNL WRHLGDRRAE LSSSAFRREC QREFLHYVRI
REWQDLHGQL RQICRDMGWT LDSIGREPAP SADLIHQALL SGLLSQIGLR ESDGKEFLGA
RNATFLIFPA SALYRKPPRF VMAGELVETS RLFARTAAKI EPEWAEKLAG PLAKRQYSQP
HWSTKREAVL AKERVTLFGV PLVADRTVSF GTVDPEAARE IFLRHALVQG EWRTRHAFFA
RNRALLDDAS YLEDKARRRD IVVDEDALFD FYDLRVPEGI VSSRHFDSWW KKASREDPGL
LDFTEDDLLV DGSAGITGEA YPAAWLQGRI EVPLKYRFEP GAADDGVTAR IDVKDLATVR
ADGFEWLVPA MRDELATALI KTLPKQLRRE VVPAPDFAAA ALARLTPRAE PLTDGLAREL
TQLSGTVIRP DDFSPEQLPA HLRVTFVVIG DDGRELGAGK DLTALKRTLG AAVQEDLSSR
AGAYERAPAR EWTAQTLGDV PRRIDTEVRG SRVTGFGSLY PDGDRAGVRV VADEAEQTRL
MAAGLDVLLA NVLPAAHKSA LQGLNPRERM ALSQSPYESP MALLEDCRRR AIADLRAQAG
TAWTPDEFTS LAATVRARLG ETQQQYLTWV ASAVSTATEV RGSIGNPPPA ARDAADDIAD
QLDSLLFPGF VGATAGVHLR HLPRYIQGAA VRWAALPASI DRDDRGMATL DRVYGALTAK
LDSLPQHRRD AGVEQVSWQI EELRVSLFAQ ALGTAGSVSE KKVLAAIAAL S
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