Gene Tpau_1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1809 
Symbol 
ID9155959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1887898 
End bp1888542 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content74% 
IMG OID 
ProductPeptidoglycan-binding lysin domain protein 
Protein accessionYP_003646766 
Protein GI296139523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0414722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCGA TCATCGATCG GGACACCATC GAGGCAGGCC AGAGTGCACC CCGTCGTGCC 
GGGCTGGTTG GCCACGGTAC GGCGGCCACG GTTCATCGCC GCGGCGCCGC GCAGGCGCGG 
GGGCTCTCGC CCCGGCTCGT CCGCAGTCGC TCCGGTGAGG GCTCCGGGGA TTCGATCACC 
GTGTCGAACA CGCCGGAACG AGGCGATGTT CGAACCGCTG GTTCGGCCCC ATCGGCCATC 
CGAGTGGTCG GCGCCCGCGG TGCGCGGACG CGTTCCATCG AACGCATCCG CGTGCGCGAA 
TCGGCACGCC GTCCGCGCGG CTACTCCCGG GCCGACGGGT GCGCGCGGCG CAGTCCTCGG 
CCCACCTGGC TCGCCTGCGT GCTCGCCGCG GCGGCCACCT TCGCCACAGT GGTGCTGCTC 
TTCGGCGGCG CCTCGCCCGA GCCGCAGGCC GCCCCGGTGT CCGCCGGCAC CCCGGCCCTG 
ACATCGGTGG TCACCGTCCG CTCGGGGCAG ACGCTCGAGC AAGTCGCACG TGAGATCGCG 
CCCGAGCGCC CCGTCGCCTC CGTCGTCGAC GAGGTCTCCC GCATCAACGG GCTCACCGAC 
GGCCGCGTCC GCGCCGGACA GACTCTCGTC ACTCCGCGGT ACTGA
 
Protein sequence
MTAIIDRDTI EAGQSAPRRA GLVGHGTAAT VHRRGAAQAR GLSPRLVRSR SGEGSGDSIT 
VSNTPERGDV RTAGSAPSAI RVVGARGART RSIERIRVRE SARRPRGYSR ADGCARRSPR 
PTWLACVLAA AATFATVVLL FGGASPEPQA APVSAGTPAL TSVVTVRSGQ TLEQVAREIA 
PERPVASVVD EVSRINGLTD GRVRAGQTLV TPRY