Gene Tpau_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1808 
Symbol 
ID9155958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp1886933 
End bp1887643 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional repressor, LexA family 
Protein accessionYP_003646765 
Protein GI296139522 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.2542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAGG AACGGCAGAT TCAACACCGC GACAAGCGCT TCCGCGATGC GCAGGGCAAT 
GTGTCCGAGG ATCACCTCAC GCGGCGGCAG AAGCAGGTGC TCGAGGTGAT CCGTAGGTCC 
GTCCGAGACC GCGGCTACCC GCCCAGCATC CGCGAGATCG GCGACGAGGT CGGGCTCACC 
TCCACCTCAT CCGTCGCTCA CCAGCTGCGC ACGCTCGAAC GCCTCGGCTT CCTGCACCGG 
GATCCGAACC GTCCGCGTGC GGTGAACGTC CAAGGCACCG AGGAACGCAC CGCACAGGTC 
ATCCAGCGGG TCATGGAAGA CGAAGAGCGA ATGCCCGAGC CGGCCTTCGT CCCGGTACTC 
GGCCGGATCG CGGCGGGCGG GCCCATCCTC GCCGAGGAGG CTGTGGAGGA GATCTTCCCC 
CTCCCCCGCG AGCTCGTGGG CGAGGGGTCG CTGTTCCTGC TCAAGGTGGT CGGCGAGTCC 
ATGGTGGACG CCGCGATCTG CGACGGCGAC TGGGTCGTGG TGCGGCAGCA GTCGGTCGCG 
GAGAACGGTG ACATCGTCGC TGCGATGCTC GATGGCGAGG CCACGGTGAA AACGTTCCGG 
CGCACCGGCA AGGACGTCTG GCTGATGCCC CACAACCCGG CGTTCGATCC GATCCACGGT 
AATGACGCCG TGGTGCTCGG CAAGGTCGTC ACCGTCATGC GCCGCATCTG A
 
Protein sequence
MTEERQIQHR DKRFRDAQGN VSEDHLTRRQ KQVLEVIRRS VRDRGYPPSI REIGDEVGLT 
STSSVAHQLR TLERLGFLHR DPNRPRAVNV QGTEERTAQV IQRVMEDEER MPEPAFVPVL 
GRIAAGGPIL AEEAVEEIFP LPRELVGEGS LFLLKVVGES MVDAAICDGD WVVVRQQSVA 
ENGDIVAAML DGEATVKTFR RTGKDVWLMP HNPAFDPIHG NDAVVLGKVV TVMRRI