Gene Tpau_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1807 
Symbol 
ID9155957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1885722 
End bp1886867 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content69% 
IMG OID 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003646764 
Protein GI296139521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.239478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTCA CACTCACCGA CGAACAAGCC CTACTGCGCG ACTCCGTGAC CGCGTACCTG 
ACGGGACGGT ATCCACTCCT CGAATCGCGC CGGGCCGCCC GCTCTCCGGA ACGCTGGCAG
CCGGAAGTGT GGGAGGCGTT CGCCTCCGAG CTCGGGATCC TCGCCGCGAC GCTGCCGGAG
TCGGTCGGCG GGCTCGGCGG CGGGCCGGAG GAGATGATGG TGATCAGCGA AGCGCTCGGT
GCCGCGCTCG TCGTGGAACC CTATGTGGGT ACCGCGGTGG TGGGCGGTGC CCTGCTGACG
GGGGCGGGCG GGCCGGCAGC CGACGCCCTC GCCGAATCCG TCGCCGAAGG TCACGCGCGG
ATCGCCCTCG CTCTCACCGA ACCGGAATCG GGCCGCGAAC CGTGGGACGT TCACTGCACG
GCCACGCCGG ACGGCGACGG CTACGTCCTC TCCGGCGAGA AGATCGTGGT CGCTGATCTA
CCTCTGGCGA CGCATCTGAT CGTCGTGGCC CGGACCTCCG GGGATCGGCT CGACCGGGAC
GGATTGTCGC TGTTCCTGAT CGACTTCGAC GCGCAGAAGC CGCCGACAGG CGTCGAGGCG
CACTATTACC GGACGATCGA CGACCACCAC ACCGGAGATC TGCGCTTCAC CGATCTTGAG
GTTCCGGCCT CCGCACTGCT CGGCACCGCC GGTCAGGCGT GGCCGGTGGT CGAACGCGCA
CTGGACAACG GCACCGCTGC CGTGTGCGCC GAGGCGGTGG GTGTGATGCG CCGCGTGGTG
GCCGATACGG TGGAGTACGC CAAGCAGCGC AAGCAGTTCG GCGTGCCGAT CGGATCGTTC
CAGGCCTTGC AGCACCGGAT GGTCGACATG TCGCTCGAAC TGGAGCAGGC CGTGGCGGCG
ACCTATCTCG CGGTGCTCAA CCTGTCCGGT CCCGACCGAC GCCGCGCGCG GGCGGTCTCG
GCCGCGAAGA TCACCATCGC GCGGGCGGCC AGATTCATCG GCCAGAACGC CGTCCAGTTG
CACGGCGGTA TGGGGATGAC CGAGGAACTG GCGATCGGGC ACTACTTCAA GCGGCTCACC
GCGATCGAGA CGGAGTTCGG CTCCGCCACC GATCACCTGC ACCGGTACGC CGAGCTCGCC
CGCTGA
 
Protein sequence
MDFTLTDEQA LLRDSVTAYL TGRYPLLESR RAARSPERWQ PEVWEAFASE LGILAATLPE 
SVGGLGGGPE EMMVISEALG AALVVEPYVG TAVVGGALLT GAGGPAADAL AESVAEGHAR
IALALTEPES GREPWDVHCT ATPDGDGYVL SGEKIVVADL PLATHLIVVA RTSGDRLDRD
GLSLFLIDFD AQKPPTGVEA HYYRTIDDHH TGDLRFTDLE VPASALLGTA GQAWPVVERA
LDNGTAAVCA EAVGVMRRVV ADTVEYAKQR KQFGVPIGSF QALQHRMVDM SLELEQAVAA
TYLAVLNLSG PDRRRARAVS AAKITIARAA RFIGQNAVQL HGGMGMTEEL AIGHYFKRLT
AIETEFGSAT DHLHRYAELA R