Gene Tpau_1801 details

Gene Information

• Locus tag: Tpau_1801
• ID: 9155951
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1880879
• End bp: 1881505
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 69%
• Product: protein of unknown function DUF1345
• Protein accession: YP_003646758
• Protein GI: 296139515

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCCGCCT CGTCCCGGCT CGCGGCGTCG GCCGTGATCG GGGTTGCCGC GGCTCTGGTC 
GTCGGTGGCC TGGTCGATCC GACGCTCGGC GTGCTCGTCG GTATCGGCGC AGCGGCCAGC 
GTCTTCGCGG CCTCGGGATG GGTGGTGCTG TGGCCGCTGG ACGCGGCGTC GACCCGGGCG 
ACGGTGCAGC GCGAGAACTT CCGGCCGCGG GTAGCGGAAC TGGTGGTGGC GGTGCTCGCA 
CTGAGCGGAT TGGTCGCGAT CGTGGCGCTG CTGGTGGCCG GGCGGTCCGA GAACAAGGAT 
GCACCGGCCG CCGCGGCCCT CATCGCCGCC TTCGCGGTGT GGGCGGCGCT GCACCTGACC 
TACTCCACGC AGTACGCCGC GCTCTATTAC GGCGACCGCG GCGACGAACC CGGTGGGATC 
GACTGGGGCA GTGACGATCC GCCTGCGTAT CGGGACTTCT TCTACTTCAG TTACAACCTG 
GGAATGACGT ATCAGGTCTC CGACACGGGG GTCTCCTCGC GCGAGATCCG CAGTGTCGTG 
CTCCGGCATT GCCTGTTGTC CTACGTCTTC GGAACGTTGA TCCTGGCGAC CGCGATCAAC 
CTGGTGGTGG GGATCGTCGC GGGCTAG 

 

Protein sequence

MSASSRLAAS AVIGVAAALV VGGLVDPTLG VLVGIGAAAS VFAASGWVVL WPLDAASTRA 
TVQRENFRPR VAELVVAVLA LSGLVAIVAL LVAGRSENKD APAAAALIAA FAVWAALHLT 
YSTQYAALYY GDRGDEPGGI DWGSDDPPAY RDFFYFSYNL GMTYQVSDTG VSSREIRSVV 
LRHCLLSYVF GTLILATAIN LVVGIVAG