Gene Tpau_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1794 
Symbol 
ID9155944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1873972 
End bp1874613 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003646751 
Protein GI296139508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.489203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCGCA TGAACGCCGA CAGCGAGAAC CCGCGCAGCG CCGAAGAGCT CGATGAGCTG 
CGCACGCAGG TCGAATCCGT GGAGCGCAAG CTCGCCGGCG AGTTCGAGGC CAGCCCGCGC 
ATCGTCGTGG CGGCGGCCGC CGTGCTCGTG GTGATCGGTT CGCTCGCACT GCCGCACACC 
GGCTCGGTGA CCGGACTGCA GATCCTGATG GGCGACGCCC ACGCCGACAA CAGCTCGCTG 
GTGATCGTCT CCAAGGTATT CGTCTGGCTC GAGGTGCTGT TCGGGGTGCT CGCCTCGGGC 
GCCGCGCTGC TGACCCGCCG CTGGGTGCTC GCGGTGATCG CCGGCGCGGG TTGCGGCGTG 
GGATTCGTGT TCGGTCTGTT GTCGGTGTGG TCGCGGCAGA CCCCCGGCCT GCACGGTGAG 
CCCCCGTCGG GTGCCGGCAT CGGCCTGTTG CTCGGCTGGT TCGCGATGAT CGTGCTCGCG 
ATCGTGTGGA TCAAGACCAT CTGGGCCCGC ACCGCGTTCC AGCGCGCCGC GGAGCAGGAG 
CGCCGCGATG CCGCCGAGAA GTGGGAGGGC TTCGCCCGCA CCAACAACAT CGGCGTGCAC 
CGCCCGGTCC AGGCCGAGCG CCCCTCCACC GATCAGCAGT AG
 
Protein sequence
MDRMNADSEN PRSAEELDEL RTQVESVERK LAGEFEASPR IVVAAAAVLV VIGSLALPHT 
GSVTGLQILM GDAHADNSSL VIVSKVFVWL EVLFGVLASG AALLTRRWVL AVIAGAGCGV 
GFVFGLLSVW SRQTPGLHGE PPSGAGIGLL LGWFAMIVLA IVWIKTIWAR TAFQRAAEQE 
RRDAAEKWEG FARTNNIGVH RPVQAERPST DQQ