Gene Tpau_1789 details

Gene Information

• Locus tag: Tpau_1789
• ID: 9155939
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 1869616
• End bp: 1870299
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 62%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003646746
• Protein GI: 296139503

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCACCA TGTGGGACTA CATGGGGCCG CTGCTTTGGC CCGCGTTCTG GATGACCATC 
AAGCTCACCG TGTTCTCGGG TGTCATCGCT CTGGTGTGGG GCATGATCCT CGCCGGTATG 
GCGGTCGGTC CCGTGCCGAT CATGCGGTCG TTCGCGAACT TCTACGTCAA CGTCGTCCGG 
AACACGCCGC TCACGCTGAT CATCCTGTTC TGCTGGATGG GACTGTTCAT GATGCTGGGG 
CTCACTCTGG CGCCGCAGAA CGACAGCTTC ATCAAGGAGA ACAACTTCCG GCTGGCGATC 
CTGGGCCTGT CGTTCTACAC CGCCGCGTTC GTGTGCGAGA CACTGCGTTC GGGTATCAAC 
ACCGTGCCGG TCGGCCAGGC CGAGGCGGCC CGCGCTCTCG GCCTGCCCTT CTTCACCGTA 
TTCGGCACGA TCGTTCTCCC CCAGGCGATC CGCGCCGTGG TCGCTCCAAT GGGCAGCGTG 
CTCATCGCCC TGACCAAGAA CAGCACGATC GCCTCGGTGA TCGGTGTTTC CGAGGCAGCC 
CTACTGATGA AGTCGTCGGT CGAGACCTAT CCGGACTCGA TCTACACGAT CTTCGCGATC 
ATCGCCGTCG GCTTCGTGAT CCTTACGCTG CCACTCGGCC TGCTGTTCAC GTACCTGGCC 
AACCGATTGG CGGTGAAGCG ATGA 

 

Protein sequence

MTTMWDYMGP LLWPAFWMTI KLTVFSGVIA LVWGMILAGM AVGPVPIMRS FANFYVNVVR 
NTPLTLIILF CWMGLFMMLG LTLAPQNDSF IKENNFRLAI LGLSFYTAAF VCETLRSGIN 
TVPVGQAEAA RALGLPFFTV FGTIVLPQAI RAVVAPMGSV LIALTKNSTI ASVIGVSEAA 
LLMKSSVETY PDSIYTIFAI IAVGFVILTL PLGLLFTYLA NRLAVKR