Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1784 |
Symbol | |
ID | 9155934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1862474 |
End bp | 1866058 |
Gene Length | 3585 bp |
Protein Length | 1194 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | Pyruvate/ketoisovalerate oxidoreductase |
Protein accession | YP_003646741 |
Protein GI | 296139498 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCTTG ACGCCAACTC GCCGACCGAC CTCCCCGGTG ACAACACCGA ACGAGATCTG GCGGGCGATC ACGATGCGGA CCCCCGAGGC GGGCAGTCGG CTTCCGTCGA ATCCTTCTCG CTGGACGATC GGTACACGCG CGAACAGGGC ACGATCTATC TCACCGGCAT TCAGGCCCTG GTGCGCATGG TGCGCGATCG GGCGCGGCTC GATCGCCGCC AGAACCTCAC GACCGGCTCG TTCATCTCCG GTTACGAGGG TTCGCCGTTG GCCGGGTACG ACCTCGAGAT CGCCAAACGC GGTAAGTACC TCACCGAGTA CGACATCGTG CACCGTCCCG GCCTCAACGA GGAGCTCGCC GCCACGTCGG TGATGGGCTC GCAGGTGGCC GCGCAGGTGG GCACTCTGGC CCGTGGGCTC GACGGTGTCG TCGGCTACTG GTACGGCAAG GCCCCGGGCC TCGACCGTGC CACCGACGCG CTGCGTCACG CCAATCTCAT CGGCACCCAT GCGAGCGGCG GTGCCGTCGC TCTCGTCGGC GACGATCCGG GCGCCAAGAG TTCGACTGTG CCGTGCGCCT CCGAGATGGC CCTCGCCGAT CTCTACATGC CGATCCTCTA CCCGGCCGAT TCGCAGGACA TCCTCGACCT CGGCGTGCAC GCCGCGATCA TGTCGCGCGT GTCGGGCCTG TGGACCTCGC TGAAGATCTC GGCGCACGTC GCCGATGGCG CCTCGTGCGC CGACGTGCAC CCGGATCGGG TCCTCCCGGT CTACGGCGAT CTGGGGATGA GCCCGCACGT TCCGTCGGGC AAGCTGCTCG GTGCGAATCT GATGGAGCTG GAGCAGAATC AGCTCACGGT GCGGATGCCG CGCGCCACCG AATACGCCCG GATCAACCGA CTCAACCGGA TCACGGTGCG CAGTTCCGAT GACCGGATCG GCATCGTGGC GGCCGGCAAG ACGTACATGG ACGTGCGGGA GTCGCTGCGG CTCATCGGTA TCGACGATGC CGAGCTGAAC AAGCTGGGCA TCCGCATCCT CAAGATGGGT ATGGTCTATC CGTTCGAGCG GCAGATCATG CACGAATTCA TCGACGGCCT CGACGAGGTG ATCGTGGTCG AGGAGAAGCG CGACTTCCTC GAGACCATGA TGCGCGACAT CTTGTTCCGG CACCCGGGTG CCCCGAACAT CGTGGGCAAG GCCAACGAGG ACGGCTCCAC CCTGTTCTCC CGCTTCGGCG AGCTGGATCA GGATTCGGTG ACCCGCGGCT TGGCCTCGCG CCTGGCGCGT GTGCACGGCG TGTCCGCCGC GAGGGATTGG TTGGACCGGA AGGCGCAGCA GCGCACCCGG ATCGAGCTGC CGCTCGCGGT GCGCAGTCCC TATTTCTGCT CGGGCTGTCC GCACAACACC TCCACCAAGG TCACCGACGA CACGCTCGTG GGTGCCGGCA TCGGCTGCCA CGCGATGGTG CTGCTGATGG ACCCGCAGCA GGTGGGCGAT ATCACCGGCG TCACCCAGAT GGGTGGCGAG GGCGCGCAGT GGGTGGGCAT GGCCCCGTTC CTCACCGAGA AGCACTTCGT GCAGAACATC GGCGACGGCA CCTTCATGCA TTCGGGCTCG CTGGCCCTGC GCCAGTCGGT CGCGTCGGGG GAGCGGATCA CCTACAAGCT GCTGTTCAAC GGCACCGTCG CGATGACGGG CGGCCAGGAC CCGGTGGGTC AGATGACGCT CCCGCAGATC TGCGCGCTGC TGCAGGCCGA GCGCGTCACC AAGATCGTCG TGACCTCCGA CGATCCGAAG CGCACCGCTG CCTCGGGCCT GCCCAAGGGC GTTCAGGTGC GCCACCGCGA GGACATGATC GAGGTGCAAC GCGAGCTCGC GGAGCTGCCG GGTGTCACCG TCCTGGTGCA CGACCAGTAC TGCGCGGCGG AGAAGCGGCG CAAGCGCAAG CGCGACAAGT ACCCCACGCC GAATCAGCGA GTGGTGATCA ACGAGCGCAT CTGCGAGGGC TGCGGCGACT GTGGTGTGAA GAGCAACTGC CTGTCGGTGC ATCCGGTCGA GACGGAGTTC GGCCGCAAGA CGCGGATCGA TCAGAGCTCG TGCAATCTCG ACTTCTCGTG CCTCAAGGGG GACTGCCCGT CGTTCGTCAC CGTCACTCCC GGAACGCAGG GCAAGATCCG CAAGTCCGTG CCGGACATCG GCGCGGACGA TGTGCCGCAG CCGGTCAAGG CGCGGCGCGA ATCCGACGGC TTCGCGATCC GGGTCACCGG TATCGGTGGC ACGGGTGTGG TCACGGTGTC GCAGATCCTT GCGACGGCGA CGGTGCTCGA CGGGCACGTC GCGCGGACCG TCGACATGAC CGGCATGGCG CAGAAGGGCG GCGCCGTGAT CTCCGATGTC AAGGTGTCCG CCGGCTACGT CGAGCAGGCC GCGAAGGTGG CTTCGGGTGA CTGCGACGTG TACCTGTCCT GCGACGGCCT CGTCGGCGTC GATCCCGCGA ACCTCAAGGT GGCATCGCCG GAACGCACCA CGTCGATCGT CTCGACCACC AAGATCCCCA CGGGGCAGAT GGTGATCGAC ACGGCGGTCG GCTATCCGGA TCAGGGCAGT ATCCACGCCG CGATCGATCA GGCCTCGCTG CGGTCGGTGT ACCTCGATCC GGGCGATCTG ACGCTGCAAC TGTTCGGCGA CGAGCAGTAC GCCAACATGT TCATGGTGGG CGCCGCCTTC CAGACCGGTG CGCTGCCGAT CAGCTCGGCG TCGATCGAAC GGGCCATCGG TCTCAACGGT GTGGCGGTGG AGAAGAACCT GCAGGCCTTC CGCCGCGGCC GTCAGTCCGT GGCCGACCCG GCGGCGGTGA CCGCGGCGAT CGATGCGCTC CATCCGATGC CGGCGCCGGT CGCGCTGAGC GCCTTCGCGA CCGCGCAGGC CGGCAAGCTC GACGGTGCGT CGGCGGAGGT GCTGCGGCAG GTCGCGCTCC GAGTCGACGA ATTGGTCGCC TACCAGGACC AGGCCTACGC CACCCGGTAC GCCGACGATG TGGCTCGCGT GTTTCGCGCC GAGAAGGCCT GGGGCTCGGA GGATCTCACC GCCGCGGTAG CGCACAACCT GCACAAGCTC ATGGCGTACA AGGATGAGTA CGAGGTGGCA CGCCTGAGCC AGGACGCGGA GTTCGCGGCG CAGGTGGCCG ACGAGTTCGG TGCCGACGCG AAGAAGGCGA TCCGCCTGCA CCCGCCGACG CTGCGCGAGA TGGGCCTGAA GAACAAATTG GCCCTGGGTG AGTGGGTGAA CCCGGGGATG AAGACGCTGG CCACGATGAA GCGTCTGCGC GGTACCAAGC TCGACCCGTT CGGTATGACC GCGATGCGCC GCATGGAGCG CACCCTGATC GCCGAGTACC GCGCTCTCAT CGGCCTGATG ATCGCCGCGG TCGAGGGCGG CCGGGTGACC GACGAGCAGC GCGAGCAGGT GATCGCGCTC GCGGAACTGC CCGATATGGT GCGCGGCTAC GAGGGCGTGA AGACGGCCAA TGTCGAGAAG TACCGCGCCG CCGTCCAGAA TCAGTTGGAG ACGCTGGGCT GGTAA
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Protein sequence | MTLDANSPTD LPGDNTERDL AGDHDADPRG GQSASVESFS LDDRYTREQG TIYLTGIQAL VRMVRDRARL DRRQNLTTGS FISGYEGSPL AGYDLEIAKR GKYLTEYDIV HRPGLNEELA ATSVMGSQVA AQVGTLARGL DGVVGYWYGK APGLDRATDA LRHANLIGTH ASGGAVALVG DDPGAKSSTV PCASEMALAD LYMPILYPAD SQDILDLGVH AAIMSRVSGL WTSLKISAHV ADGASCADVH PDRVLPVYGD LGMSPHVPSG KLLGANLMEL EQNQLTVRMP RATEYARINR LNRITVRSSD DRIGIVAAGK TYMDVRESLR LIGIDDAELN KLGIRILKMG MVYPFERQIM HEFIDGLDEV IVVEEKRDFL ETMMRDILFR HPGAPNIVGK ANEDGSTLFS RFGELDQDSV TRGLASRLAR VHGVSAARDW LDRKAQQRTR IELPLAVRSP YFCSGCPHNT STKVTDDTLV GAGIGCHAMV LLMDPQQVGD ITGVTQMGGE GAQWVGMAPF LTEKHFVQNI GDGTFMHSGS LALRQSVASG ERITYKLLFN GTVAMTGGQD PVGQMTLPQI CALLQAERVT KIVVTSDDPK RTAASGLPKG VQVRHREDMI EVQRELAELP GVTVLVHDQY CAAEKRRKRK RDKYPTPNQR VVINERICEG CGDCGVKSNC LSVHPVETEF GRKTRIDQSS CNLDFSCLKG DCPSFVTVTP GTQGKIRKSV PDIGADDVPQ PVKARRESDG FAIRVTGIGG TGVVTVSQIL ATATVLDGHV ARTVDMTGMA QKGGAVISDV KVSAGYVEQA AKVASGDCDV YLSCDGLVGV DPANLKVASP ERTTSIVSTT KIPTGQMVID TAVGYPDQGS IHAAIDQASL RSVYLDPGDL TLQLFGDEQY ANMFMVGAAF QTGALPISSA SIERAIGLNG VAVEKNLQAF RRGRQSVADP AAVTAAIDAL HPMPAPVALS AFATAQAGKL DGASAEVLRQ VALRVDELVA YQDQAYATRY ADDVARVFRA EKAWGSEDLT AAVAHNLHKL MAYKDEYEVA RLSQDAEFAA QVADEFGADA KKAIRLHPPT LREMGLKNKL ALGEWVNPGM KTLATMKRLR GTKLDPFGMT AMRRMERTLI AEYRALIGLM IAAVEGGRVT DEQREQVIAL AELPDMVRGY EGVKTANVEK YRAAVQNQLE TLGW
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