Gene Tpau_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1784 
Symbol 
ID9155934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1862474 
End bp1866058 
Gene Length3585 bp 
Protein Length1194 aa 
Translation table11 
GC content67% 
IMG OID 
ProductPyruvate/ketoisovalerate oxidoreductase 
Protein accessionYP_003646741 
Protein GI296139498 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCTTG ACGCCAACTC GCCGACCGAC CTCCCCGGTG ACAACACCGA ACGAGATCTG 
GCGGGCGATC ACGATGCGGA CCCCCGAGGC GGGCAGTCGG CTTCCGTCGA ATCCTTCTCG
CTGGACGATC GGTACACGCG CGAACAGGGC ACGATCTATC TCACCGGCAT TCAGGCCCTG
GTGCGCATGG TGCGCGATCG GGCGCGGCTC GATCGCCGCC AGAACCTCAC GACCGGCTCG
TTCATCTCCG GTTACGAGGG TTCGCCGTTG GCCGGGTACG ACCTCGAGAT CGCCAAACGC
GGTAAGTACC TCACCGAGTA CGACATCGTG CACCGTCCCG GCCTCAACGA GGAGCTCGCC
GCCACGTCGG TGATGGGCTC GCAGGTGGCC GCGCAGGTGG GCACTCTGGC CCGTGGGCTC
GACGGTGTCG TCGGCTACTG GTACGGCAAG GCCCCGGGCC TCGACCGTGC CACCGACGCG
CTGCGTCACG CCAATCTCAT CGGCACCCAT GCGAGCGGCG GTGCCGTCGC TCTCGTCGGC
GACGATCCGG GCGCCAAGAG TTCGACTGTG CCGTGCGCCT CCGAGATGGC CCTCGCCGAT
CTCTACATGC CGATCCTCTA CCCGGCCGAT TCGCAGGACA TCCTCGACCT CGGCGTGCAC
GCCGCGATCA TGTCGCGCGT GTCGGGCCTG TGGACCTCGC TGAAGATCTC GGCGCACGTC
GCCGATGGCG CCTCGTGCGC CGACGTGCAC CCGGATCGGG TCCTCCCGGT CTACGGCGAT
CTGGGGATGA GCCCGCACGT TCCGTCGGGC AAGCTGCTCG GTGCGAATCT GATGGAGCTG
GAGCAGAATC AGCTCACGGT GCGGATGCCG CGCGCCACCG AATACGCCCG GATCAACCGA
CTCAACCGGA TCACGGTGCG CAGTTCCGAT GACCGGATCG GCATCGTGGC GGCCGGCAAG
ACGTACATGG ACGTGCGGGA GTCGCTGCGG CTCATCGGTA TCGACGATGC CGAGCTGAAC
AAGCTGGGCA TCCGCATCCT CAAGATGGGT ATGGTCTATC CGTTCGAGCG GCAGATCATG
CACGAATTCA TCGACGGCCT CGACGAGGTG ATCGTGGTCG AGGAGAAGCG CGACTTCCTC
GAGACCATGA TGCGCGACAT CTTGTTCCGG CACCCGGGTG CCCCGAACAT CGTGGGCAAG
GCCAACGAGG ACGGCTCCAC CCTGTTCTCC CGCTTCGGCG AGCTGGATCA GGATTCGGTG
ACCCGCGGCT TGGCCTCGCG CCTGGCGCGT GTGCACGGCG TGTCCGCCGC GAGGGATTGG
TTGGACCGGA AGGCGCAGCA GCGCACCCGG ATCGAGCTGC CGCTCGCGGT GCGCAGTCCC
TATTTCTGCT CGGGCTGTCC GCACAACACC TCCACCAAGG TCACCGACGA CACGCTCGTG
GGTGCCGGCA TCGGCTGCCA CGCGATGGTG CTGCTGATGG ACCCGCAGCA GGTGGGCGAT
ATCACCGGCG TCACCCAGAT GGGTGGCGAG GGCGCGCAGT GGGTGGGCAT GGCCCCGTTC
CTCACCGAGA AGCACTTCGT GCAGAACATC GGCGACGGCA CCTTCATGCA TTCGGGCTCG
CTGGCCCTGC GCCAGTCGGT CGCGTCGGGG GAGCGGATCA CCTACAAGCT GCTGTTCAAC
GGCACCGTCG CGATGACGGG CGGCCAGGAC CCGGTGGGTC AGATGACGCT CCCGCAGATC
TGCGCGCTGC TGCAGGCCGA GCGCGTCACC AAGATCGTCG TGACCTCCGA CGATCCGAAG
CGCACCGCTG CCTCGGGCCT GCCCAAGGGC GTTCAGGTGC GCCACCGCGA GGACATGATC
GAGGTGCAAC GCGAGCTCGC GGAGCTGCCG GGTGTCACCG TCCTGGTGCA CGACCAGTAC
TGCGCGGCGG AGAAGCGGCG CAAGCGCAAG CGCGACAAGT ACCCCACGCC GAATCAGCGA
GTGGTGATCA ACGAGCGCAT CTGCGAGGGC TGCGGCGACT GTGGTGTGAA GAGCAACTGC
CTGTCGGTGC ATCCGGTCGA GACGGAGTTC GGCCGCAAGA CGCGGATCGA TCAGAGCTCG
TGCAATCTCG ACTTCTCGTG CCTCAAGGGG GACTGCCCGT CGTTCGTCAC CGTCACTCCC
GGAACGCAGG GCAAGATCCG CAAGTCCGTG CCGGACATCG GCGCGGACGA TGTGCCGCAG
CCGGTCAAGG CGCGGCGCGA ATCCGACGGC TTCGCGATCC GGGTCACCGG TATCGGTGGC
ACGGGTGTGG TCACGGTGTC GCAGATCCTT GCGACGGCGA CGGTGCTCGA CGGGCACGTC
GCGCGGACCG TCGACATGAC CGGCATGGCG CAGAAGGGCG GCGCCGTGAT CTCCGATGTC
AAGGTGTCCG CCGGCTACGT CGAGCAGGCC GCGAAGGTGG CTTCGGGTGA CTGCGACGTG
TACCTGTCCT GCGACGGCCT CGTCGGCGTC GATCCCGCGA ACCTCAAGGT GGCATCGCCG
GAACGCACCA CGTCGATCGT CTCGACCACC AAGATCCCCA CGGGGCAGAT GGTGATCGAC
ACGGCGGTCG GCTATCCGGA TCAGGGCAGT ATCCACGCCG CGATCGATCA GGCCTCGCTG
CGGTCGGTGT ACCTCGATCC GGGCGATCTG ACGCTGCAAC TGTTCGGCGA CGAGCAGTAC
GCCAACATGT TCATGGTGGG CGCCGCCTTC CAGACCGGTG CGCTGCCGAT CAGCTCGGCG
TCGATCGAAC GGGCCATCGG TCTCAACGGT GTGGCGGTGG AGAAGAACCT GCAGGCCTTC
CGCCGCGGCC GTCAGTCCGT GGCCGACCCG GCGGCGGTGA CCGCGGCGAT CGATGCGCTC
CATCCGATGC CGGCGCCGGT CGCGCTGAGC GCCTTCGCGA CCGCGCAGGC CGGCAAGCTC
GACGGTGCGT CGGCGGAGGT GCTGCGGCAG GTCGCGCTCC GAGTCGACGA ATTGGTCGCC
TACCAGGACC AGGCCTACGC CACCCGGTAC GCCGACGATG TGGCTCGCGT GTTTCGCGCC
GAGAAGGCCT GGGGCTCGGA GGATCTCACC GCCGCGGTAG CGCACAACCT GCACAAGCTC
ATGGCGTACA AGGATGAGTA CGAGGTGGCA CGCCTGAGCC AGGACGCGGA GTTCGCGGCG
CAGGTGGCCG ACGAGTTCGG TGCCGACGCG AAGAAGGCGA TCCGCCTGCA CCCGCCGACG
CTGCGCGAGA TGGGCCTGAA GAACAAATTG GCCCTGGGTG AGTGGGTGAA CCCGGGGATG
AAGACGCTGG CCACGATGAA GCGTCTGCGC GGTACCAAGC TCGACCCGTT CGGTATGACC
GCGATGCGCC GCATGGAGCG CACCCTGATC GCCGAGTACC GCGCTCTCAT CGGCCTGATG
ATCGCCGCGG TCGAGGGCGG CCGGGTGACC GACGAGCAGC GCGAGCAGGT GATCGCGCTC
GCGGAACTGC CCGATATGGT GCGCGGCTAC GAGGGCGTGA AGACGGCCAA TGTCGAGAAG
TACCGCGCCG CCGTCCAGAA TCAGTTGGAG ACGCTGGGCT GGTAA
 
Protein sequence
MTLDANSPTD LPGDNTERDL AGDHDADPRG GQSASVESFS LDDRYTREQG TIYLTGIQAL 
VRMVRDRARL DRRQNLTTGS FISGYEGSPL AGYDLEIAKR GKYLTEYDIV HRPGLNEELA
ATSVMGSQVA AQVGTLARGL DGVVGYWYGK APGLDRATDA LRHANLIGTH ASGGAVALVG
DDPGAKSSTV PCASEMALAD LYMPILYPAD SQDILDLGVH AAIMSRVSGL WTSLKISAHV
ADGASCADVH PDRVLPVYGD LGMSPHVPSG KLLGANLMEL EQNQLTVRMP RATEYARINR
LNRITVRSSD DRIGIVAAGK TYMDVRESLR LIGIDDAELN KLGIRILKMG MVYPFERQIM
HEFIDGLDEV IVVEEKRDFL ETMMRDILFR HPGAPNIVGK ANEDGSTLFS RFGELDQDSV
TRGLASRLAR VHGVSAARDW LDRKAQQRTR IELPLAVRSP YFCSGCPHNT STKVTDDTLV
GAGIGCHAMV LLMDPQQVGD ITGVTQMGGE GAQWVGMAPF LTEKHFVQNI GDGTFMHSGS
LALRQSVASG ERITYKLLFN GTVAMTGGQD PVGQMTLPQI CALLQAERVT KIVVTSDDPK
RTAASGLPKG VQVRHREDMI EVQRELAELP GVTVLVHDQY CAAEKRRKRK RDKYPTPNQR
VVINERICEG CGDCGVKSNC LSVHPVETEF GRKTRIDQSS CNLDFSCLKG DCPSFVTVTP
GTQGKIRKSV PDIGADDVPQ PVKARRESDG FAIRVTGIGG TGVVTVSQIL ATATVLDGHV
ARTVDMTGMA QKGGAVISDV KVSAGYVEQA AKVASGDCDV YLSCDGLVGV DPANLKVASP
ERTTSIVSTT KIPTGQMVID TAVGYPDQGS IHAAIDQASL RSVYLDPGDL TLQLFGDEQY
ANMFMVGAAF QTGALPISSA SIERAIGLNG VAVEKNLQAF RRGRQSVADP AAVTAAIDAL
HPMPAPVALS AFATAQAGKL DGASAEVLRQ VALRVDELVA YQDQAYATRY ADDVARVFRA
EKAWGSEDLT AAVAHNLHKL MAYKDEYEVA RLSQDAEFAA QVADEFGADA KKAIRLHPPT
LREMGLKNKL ALGEWVNPGM KTLATMKRLR GTKLDPFGMT AMRRMERTLI AEYRALIGLM
IAAVEGGRVT DEQREQVIAL AELPDMVRGY EGVKTANVEK YRAAVQNQLE TLGW