Gene Tpau_1737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1737 
Symbol 
ID9155887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1808615 
End bp1811977 
Gene Length3363 bp 
Protein Length1120 aa 
Translation table11 
GC content69% 
IMG OID 
Productlysyl-tRNA synthetase 
Protein accessionYP_003646694 
Protein GI296139451 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAGA GCGTCCGCGA GCGGACCACC GAGGCGACTG CCACCTGGCT GGCCCGGACG 
ATGTTCTTCG CCGCCATCGT CTCACTGCTG GGCGCGCTGG TCCACGGCGA CCGCATCCTG
CCGATCCTCG CCGATGTGCT GGGCGTGCTC GGCATCCCCT CGTTCCCCAG CCTGCTGTTC
GTCGCGCTGC TGACGGTGCT TAGCGGGGCG CTGCGCCGGC GGCTCCGGGC CGCGCACACC
GTGGCCTGCG CTCTCATGGC CACGGAGGTC GCGGCGAACA TTTTCGTCCT GGTGCTCGTG
GTCACCGAGG AGCTCGGCGA CGACGACGGC AGCGCCCGCG TGCCGGCCCT GCTGGCGAAC
TACTTCGAGG CCCGCTACTC GTTGCCGGGC GCGGCCTTCG CGGCTGCGGT GAGCGCGGCG
ACGCTCGCCC TGGTCATCGC CGCCCGGCCC GCCTTCCCCG CGAAGCTGGC CCACGGGTCC
CGCCGCGCGG CGCTCGGCGT CCTGGTGGGC GGGCTACTGC TGTCGTACCT GGTCACGCTG
GCGCTCACGT TCACCTTCCC GGGCCGGCTA CGCGGTCCGG TCGAGATCGC GGTGTGGGCG
CTGCGCTCGA CCTTCGGCGT CTCACTCCCC CGCCCGCTGG ACCTGCTGCT CAACGGTCAC
TCCGGCCCGC AGTGGATCTA CTCCTTCGCC GGCATCATGT CGGCGACGGT GCTGATCCTG
GCGCTGATGG CGTTCTGGCG CGCCGGTCGC GGCGACGAGC TGATGACCGA ACCGGAGGAA
CTGGAGGTGC GCCGCCTGCT GCTCACCTAC GGCGAGGACG ATTCACTGGG CTACTTCGCC
ACCCGGCGCG ATAAGTCGGT GATCGCGGCT CCCGATCGCA GAGCGGTGGT CACCAGCCGG
GTGGTGGGCC CGGTGTCGAT GGCGAGCGCC GATCCGATCG GCGACCGCGA GTCGTGGCCC
GCCGCCGTGC ACGCCTGGCT GGAGGACTGC CGCCGACACA GCCTGTACCC GGCGGTCCTT
GCGGCGAGCA TCGACGGTGC CGCGGTGTAC GAGGCTGCCG GGCTGCGGAC ACTCAACATC
GGCGACGAGG CGATCATCCA CGTCGATCGG TTCACGCTCA AGGGGCGCGA GATGCGTGCG
GTACGGCAAG CCGTCACCCG CGTGAGCGGC GCCGGGTACA CGCTGCAGGT GCGCCGCCAC
GCGGACCTCA CCACCGAGGA GCTGACGCAG GTCGCACAGC TCGCGGAGAA GTGGCGCGGC
GAGGAGACCG AGCGCGGCTT CTCCATGGCC CTCAACCGGA TCGGCGACCC GGTGGACGGT
CGGTGCGTGC TGGTGACCGC GCACGACGCC GCCGGCGAGG TGCGCGGTCT TTTGAGCTTC
GTGCCCTGGG GCACCCGCGG CCTCTCGCTC GATCTGATGC GTCGCGACCG GAACGCGGAG
AACGGGCTCA ACGAGTTCAT GGTGGCCAAA CTCGTCGAGG CCAGCGCGGA GATCGGCATC
CGTCGCATCT CCTTGAACTT CGCCGTTTTC CGCGCTGTCT TCTTCGAAGC AGACCGGGTG
GGCGCGGGGC CCGTCACCCG GATGGTGGAT TCGGTGCTCA GCTTCGCGTC GAAGTTCTAT
CAGTTGGAAA CGTTGTATCG GTCGAACGAC AAGTACCGAC CGGACTGGGT GCCTCGGATC
CTGTGCTACG ACCCGACGCT CACCGCGGTG CGAGCCGGTA TCGCGGTGGG AACCGCCGAG
GGCTTTCTGC CGCAGATCGG GCCGAAGTTC CTCTCCGGCC CCACTGTTCC CGACGAGCAG
GATCAGCGCG ACCCAGAATT CGTCGTGCGC CTCCTCGCCG AGGAGGAGCG CCTACTGCAC
CGCGAGGCGC CCGCACCACG GCTTTCCGAA CAGCAGCGGG TGCGTCGCCG CAAACTCACG
GCGATGGAGG CGGCGGGGAT GCCCGGCTAT CCCCCCTCGG TGCCGCGCAC CGCCTCGCTC
GCCGAGGTTC GCGGGCACCT CAATGGCCTG GCCCCCGATT CATCGACGGA CACCGTTGTT
TCCGTGACCG GCAGGGTGCG TGGCGTGCGT GACTACGGTG GCGTCACCTT CGTCGATCTT
CACGAGGACA GGGCCACCTT GCAGGTGATC GCCGAGCGCG GTCGTACTCC CGACGACGTG
CGCGCCTTCT GGCGCGAGTC GATCGACATG GGCGACCTGG TGTCGGTGAC CGGTGAGATG
GTCACTTCGC ACACGGGTGA GCTCTCGGTT CTGCTCCAGG ACTGGGCCAT GGCCGGGAAG
TGCCTCTCAC CGGTCCCGAA GCCGCGGGTG CGACTCGGCG ACGAGACCAG GGCGCGCAGC
CGCTCCCTCG ACCTGATGAC CGATGACGGT GCTGTCGACC TGCTCTACCG CCGCTCGCGG
GCGGTCGCGG CAATGCGCGC CGCGTTCACC GATCGCGGCT TCACCGAGGT CGAGACGCCG
ATGCTGCAGT CGGTGCACGG CGGCGCGGCG GCACGCCCGT TCACCACGCA CATCAACGCC
TACGACATGG ATCTGTACCT CCGGATCGCG CCGGAGCTCT ACCTCAAGCG GCTCGCGGTG
GGAGGCATGG GCCGGATCTT CGAGATCAAC CGGAACTTCC GCAACGAGGG CGCCGACGCC
ACCCACAACC CGGAGTTCAC CTCGCTCGAG GCCTACGAGG CGTACGGCGA CTACACCACC
ATGCGAACAC TGACCCGCGA GGTGATCCTC GGCGCCGCGA TCGCCGTCAA CGGCCGGCCG
ATCGCGGTAC GGCCCGACGG TTCCGGTGGA ACACGCGAGG TGGACCTCAC CGCCGAATGG
CCGGTGATCA CGGTGCACGA GGCTGTTTCC CGGGCCGTCG GCACGTCGGT GACACCCGAC
AGCGAGGTCG AGGAGTTGGA GGCGCTGTGC AAGCAGTGGC ACGTCGCGGC TCCCCGGGGA
GCGTCGGCGG GCAAGCTGGT CATGGAACTG TACGAGGGGC TGGTGGAAAA GCAGACCGAG
TTCCCCACGT TCTACTGCGA TTTCCCGATC GAGGTCTCGC CACTGGCGCG CAGACACCGC
CGCGATCCGC GACTCACGGA ACAATGGGAC CTGGTGGGTT TCGGCGCCGA GCTGGGTACT
GCCTACACGG AACTGACCGA TCCGATCGAT CAGCGCGAGC GGCTCACCCA GCAGTCGATG
GCCGCGGCCG CCGGTGATCC GGAGGCGATG GAACTCGATG AGTCCTTCCT GGATGCCCTG
TCGTACGCCA TGCCACCGAC CGGCGGTCTC GGCATCGGTG TGGACCGGAT CATCATGCTG
CTTGCGGGAG TGAACATCCG CGCCACGCTG GCCTTCCCGT TCATCAAACC CCAGGACCGC
TGA
 
Protein sequence
MQQSVRERTT EATATWLART MFFAAIVSLL GALVHGDRIL PILADVLGVL GIPSFPSLLF 
VALLTVLSGA LRRRLRAAHT VACALMATEV AANIFVLVLV VTEELGDDDG SARVPALLAN
YFEARYSLPG AAFAAAVSAA TLALVIAARP AFPAKLAHGS RRAALGVLVG GLLLSYLVTL
ALTFTFPGRL RGPVEIAVWA LRSTFGVSLP RPLDLLLNGH SGPQWIYSFA GIMSATVLIL
ALMAFWRAGR GDELMTEPEE LEVRRLLLTY GEDDSLGYFA TRRDKSVIAA PDRRAVVTSR
VVGPVSMASA DPIGDRESWP AAVHAWLEDC RRHSLYPAVL AASIDGAAVY EAAGLRTLNI
GDEAIIHVDR FTLKGREMRA VRQAVTRVSG AGYTLQVRRH ADLTTEELTQ VAQLAEKWRG
EETERGFSMA LNRIGDPVDG RCVLVTAHDA AGEVRGLLSF VPWGTRGLSL DLMRRDRNAE
NGLNEFMVAK LVEASAEIGI RRISLNFAVF RAVFFEADRV GAGPVTRMVD SVLSFASKFY
QLETLYRSND KYRPDWVPRI LCYDPTLTAV RAGIAVGTAE GFLPQIGPKF LSGPTVPDEQ
DQRDPEFVVR LLAEEERLLH REAPAPRLSE QQRVRRRKLT AMEAAGMPGY PPSVPRTASL
AEVRGHLNGL APDSSTDTVV SVTGRVRGVR DYGGVTFVDL HEDRATLQVI AERGRTPDDV
RAFWRESIDM GDLVSVTGEM VTSHTGELSV LLQDWAMAGK CLSPVPKPRV RLGDETRARS
RSLDLMTDDG AVDLLYRRSR AVAAMRAAFT DRGFTEVETP MLQSVHGGAA ARPFTTHINA
YDMDLYLRIA PELYLKRLAV GGMGRIFEIN RNFRNEGADA THNPEFTSLE AYEAYGDYTT
MRTLTREVIL GAAIAVNGRP IAVRPDGSGG TREVDLTAEW PVITVHEAVS RAVGTSVTPD
SEVEELEALC KQWHVAAPRG ASAGKLVMEL YEGLVEKQTE FPTFYCDFPI EVSPLARRHR
RDPRLTEQWD LVGFGAELGT AYTELTDPID QRERLTQQSM AAAAGDPEAM ELDESFLDAL
SYAMPPTGGL GIGVDRIIML LAGVNIRATL AFPFIKPQDR