| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1690 |
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| Symbol | |
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| ID | 9155840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1759701 |
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| End bp | 1761539 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | penicillin-binding protein transpeptidase |
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| Protein accession | YP_003646647 |
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| Protein GI | 296139404 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0748496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACAAGC TGGGTACCCG CGTGGTCGTG ATCCTCGCTC TGGTGGCGAT GGTCGTGACC
GGCGGCTGCG CGCCCGCGAA CAGCAACGGT CCGGGGCCGG TCGCGGTGCG CTTCGGTGCG
GCGCTGGCCG AGAAGAACCT CGACGGTGCC GCCGCACTCA CCAGCTCACC CGCCGCGGCC
AAGGCCATGT TGCAGGGCAC CTTCGACGGG CTCCAGGCCC GCGGCGTCAC ACTCAAAGTG
GGCCAGGTGC GCACGCAGGG CTCCACGAGC GCCGTGGACT ACGAGTACGT GTGGGACCTG
CCCGCCGACC GCGGCAGGTC GAACCGCACG TGGACCTATC AGGGCACTCT CACCGCGGTC
CAGGAGAACG GGCAGTGGAA GGTCCGCTGG GATCCGACGG TGCTCCATCC CCGGCTCGGT
GCGAACCAGA CGATGGTGCT CAAGGCGTTG CCCGCGCCCA AGGCGCCGGT GAATTCCGCG
TCCGGCGGTT CGGTGCTGGT GCCCGGTGTG GTGACCCGGA TCCGGCTGGA GGCCGCGAAG
GTCACCGCGC CCACCACGGT GTTGGATGTG GCCGGGCAGC TCACGCGCGC ACTGCAACCC
ATCGTCCCCG GCCTCGACCC GGTGCAGCTC ACCGAACAGG CCACCTCGTT CCAGGGCCCG
TACGTGGTGG CCACGGTCAA CCAGGACGAC CTCCGCAAGC TGGCCGGCGA CGTCACGGCG
CTACCCGGAG TGAGTCTCGT CGAGCAGGCC GACCTGGTGC CCACCGACCG GACCTTCGCG
CCGGCTCTGA TGTCCTCGAT CAAGAAGAAC GTCGAGGGCG ACCTGGGCGG CAAGGACGGC
TGGGAGGTGG TGGTCCAGGC CGACACCGGC GCGCAGGTGG TCACGCTGAC CAGCACTCCT
GCGCAGACCG CTGCGGCCGC TACCGTGAGC ATCTCCCCGA TCGCGCAGGC TGCGGCGCAG
GCCGCCGTGG ATACCCGGCG CGACCGACAG GCGATGATGG TGGTGATCCA GCCGTCCACC
GGTGATGTGC TCGCGGTCGC TCAGAATCCC GAGGCCGACA AACAGGGTTC ACTGGCCACC
TCCGGCCTGT ATCCGCCCGG TTCGACCGGG AAGATCGTCA CCGCCACCGC GGCCATCTCC
ACCGGCACCG CGACACCCGA CACCATCGTC CCGTGTCCCG GCACCCTGAC CATCGGCGAG
CGCGAGATGC CGAACTACAA CCGGTTCGCG CTCGGCGACG TCACCATGCA GCGCGCCTTC
GCCCGGTCGT GCAACACCAG CTTCGCCTAC CTCGGATCGA AGATGGCTTT CGACGCCCTG
CCCACGGCCG CATCCGAACT CGGCGTGGGG CCGGACTACG ACATCCCCGG CCTACCGGTG
GCCTCGGGTG GATACCCGAC GCCCAAGGCG ATGGTGAATC AGGTCGAGGA CAGCTTCGGG
CAGGGCGAGG TCCTGGTGAG CCCGTTCTCC ATGGCGCTCG TCGCGGCAGC GGTCGCGAAG
GGTGGCGCGG TCACGCCCCG GTTGCTGGGC GGCAAGGCCA CCAAGGTCGA CGGTGACCGG
CCCCCGCTGG ACCCGCGCGC CGTCGACGGG GTGCGGGCGA TGATGCGCGA GGTGGTCGCC
TCCGGAACGG CTGAGTTGAT CCGCGGGTCC GGTGACATCC TCGGCAAGAC CGGTGAGGCC
GAGGTCGAAG GCGGCTCGCA CGCCTGGTTC GTCGGCTATC GCGGCGACCT GGCGTTCGCC
ACGATGGTGG TGCTGGGCGG CAGCTCCGAC AACGCCGTCG GCGTCACCAA GGAGTTCTTC
GACCGATTCG ACGCCCCCGT CGGCGCTGTG CCCAACTGA
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| Protein sequence | MNKLGTRVVV ILALVAMVVT GGCAPANSNG PGPVAVRFGA ALAEKNLDGA AALTSSPAAA
KAMLQGTFDG LQARGVTLKV GQVRTQGSTS AVDYEYVWDL PADRGRSNRT WTYQGTLTAV
QENGQWKVRW DPTVLHPRLG ANQTMVLKAL PAPKAPVNSA SGGSVLVPGV VTRIRLEAAK
VTAPTTVLDV AGQLTRALQP IVPGLDPVQL TEQATSFQGP YVVATVNQDD LRKLAGDVTA
LPGVSLVEQA DLVPTDRTFA PALMSSIKKN VEGDLGGKDG WEVVVQADTG AQVVTLTSTP
AQTAAAATVS ISPIAQAAAQ AAVDTRRDRQ AMMVVIQPST GDVLAVAQNP EADKQGSLAT
SGLYPPGSTG KIVTATAAIS TGTATPDTIV PCPGTLTIGE REMPNYNRFA LGDVTMQRAF
ARSCNTSFAY LGSKMAFDAL PTAASELGVG PDYDIPGLPV ASGGYPTPKA MVNQVEDSFG
QGEVLVSPFS MALVAAAVAK GGAVTPRLLG GKATKVDGDR PPLDPRAVDG VRAMMREVVA
SGTAELIRGS GDILGKTGEA EVEGGSHAWF VGYRGDLAFA TMVVLGGSSD NAVGVTKEFF
DRFDAPVGAV PN
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