Gene Tpau_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1688 
Symbol 
ID9155838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1757552 
End bp1758283 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003646646 
Protein GI296139403 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.205541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATCCG AGGTGGCGGC ACTGTTCGAC CTGACCGGAC GCACCGCATT GGTGACCGGC 
GCCAGCTCCG GGATCGGAGC GGCCGTCGCC GCCGCGCTCG ACGGTGCCGG TGCCCGGGTG 
TTGCGTGCGG GCCGCGATCG CGGTCGGCTC GGACCCGATG GCATCAGCGT CGACCTCGCC 
GGTGGTGTCG AGGACCTGAT CGCCGCGGTC GACGCCCGCG CCGACGCCGT CGATATCCTG 
ATCAACTGCG CTGGAACGAA TCCGCGTCCG CCGCTCGGCG AGATCAGCGA TGCGCTCTAT 
CGGGAGATCC TTGCGGTGAA CCTCGATGCT CCGTTCGTGC TCGGACAGCA CTACGGCCCA 
CGGATGGCCG AGCGCGGCTG GGGTCGCATC GTCAACGTCG CGTCGACGCA GGCGCACCGC 
GCCTTCGGCA ACAGCGGGGC CTACGGCGTG GCGAAGGCGG GTATCACCGG GCTCACCCGT 
TCGCAGTCCG AGGCCTGGGC GCCGCGCGGG GTCACCGCGA ATTCGCTCAC TCCGGGGTTG 
GTCGCGACGC CGATGACCAC CGCCGTGCTC GCCGATCCCG CACGCGCCGA CTACTTCCGG 
CGCCGCGCCC ACACCGGCAC GCTCGGCGCA CCGTCGGACT TCGCGGCCGC GGCGGTGTTC 
CTGTCGGGGG AAGGCGCACG GTTCGTGACG GGCCAGAACC TGTGCGTCGA CGGTGGCCTC 
TCGGTCACCT GA
 
Protein sequence
MRSEVAALFD LTGRTALVTG ASSGIGAAVA AALDGAGARV LRAGRDRGRL GPDGISVDLA 
GGVEDLIAAV DARADAVDIL INCAGTNPRP PLGEISDALY REILAVNLDA PFVLGQHYGP 
RMAERGWGRI VNVASTQAHR AFGNSGAYGV AKAGITGLTR SQSEAWAPRG VTANSLTPGL 
VATPMTTAVL ADPARADYFR RRAHTGTLGA PSDFAAAAVF LSGEGARFVT GQNLCVDGGL 
SVT