Gene Tpau_1671 details

Gene Information

• Locus tag: Tpau_1671
• ID: 9155821
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1743708
• End bp: 1744493
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 72%
• Product: Helix-turn-helix, AraC domain protein
• Protein accession: YP_003646629
• Protein GI: 296139386

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGTTTC GGTACCTACG CGGGGTGACG CACCCCGCGA TCGCCCGGGC CGTTGCCTAC 
GACATCAGCG GAGTCGTCCC GGGCACCCAC CTCGCCGTTC CCTCGCCGAC GCTCACGATG 
ATCATCGACC TCGGCCACGG CCTGGACCTG ACGGGGCCGG GTCTAACCGG GCGCACCACC 
TTCCGGCGCT GCCTGTCCGG GATGCACCCG ACGCCGTATT GGGTACATCA CGACGGGCTG 
CAACGCGGTG TCCAGGTGGA CGTCGCACCC AGCTTGGTGC GGGCCCTCAC CGGCGCCCCC 
GCGGCCGAAC TCGCAGGAGA GGCCGTCGAA CTCGACGACC TCCACCCGCG GCTCGCCGCC 
GAGTTGCACG GGCGGGTCGC CGCGGCGTCC GTCGCCGACC GGGAGACCAT CGCCGCCTCG 
GTGCTGGCGA GGTACGCCAC GTCCGGCCGC GAGGTCCAGC CCGACGCCGC CGCGGCCTGG 
TCGCTCCTCG CCGCCCGCCG CGGGCGGGTC ACCGTCGCCG AGCTCGTGGA GCGATCCGGC 
TGGTCGGCTC GGTACCTCGC GATGAAGTTC ACCGCTGAGT TCGGCATGGG CATCAAAGAG 
ACCGCTCGCC TGATGCGCTT CGACGCCGCA CGACGCGACC TCGAAGGCGG TCGCGCCGCC 
GCCGAGGTCG CCGCGCAGCG CGGCTATTCC GACCAGGCGC ACCTCAGCCG TGAGGTGCGC 
ACCTTCCTGG GGCTCACCCC GTCGGCCTAC CTCGCGCTCC GCGAGAGCGA GTTCGTCCCT 
GTGTAG 

 

Protein sequence

MEFRYLRGVT HPAIARAVAY DISGVVPGTH LAVPSPTLTM IIDLGHGLDL TGPGLTGRTT 
FRRCLSGMHP TPYWVHHDGL QRGVQVDVAP SLVRALTGAP AAELAGEAVE LDDLHPRLAA 
ELHGRVAAAS VADRETIAAS VLARYATSGR EVQPDAAAAW SLLAARRGRV TVAELVERSG 
WSARYLAMKF TAEFGMGIKE TARLMRFDAA RRDLEGGRAA AEVAAQRGYS DQAHLSREVR 
TFLGLTPSAY LALRESEFVP V