Gene Tpau_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1622 
Symbol 
ID9155772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1697470 
End bp1698141 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003646582 
Protein GI296139339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.153936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCAGGG TGCTCATCGC CGACGATGAT CAGCGTCTCG TACGCGGGCT CAGTGAGGGG 
CTCGCGTGCG AGGGCTACGC CGTGGAGACG GTCGGTGACG GTGAGGCCGC ACTGATCGCG
GCGGACGCCG GGGAGTTCGA TGTGATCGTC CTCGATGTCC AGATGCCCGG CCGCAACGGT
TACCAGGTGG TGCGTGAGCT GCGGCGCCGG GAGAATTGGA CGCCCGTGCT GATGCTGACC
GCGAAGGACG GCGAGTACGA CGTCGCGGAC GGGCTCGACG CCGGCGCCGA CGACTACCTG
ACGAAACCCT TCTCGTATGT GGTCCTGCTT GCGCGACTGC GCACCCTGCT GCGGCACGGG
GCGGCGCGGC GGCCGGTGGT GCTGCGCGTG GGCGGTTTGG AGATCGATGT CGCGGCCCGC
AGTGTGACTC GCGATGGCAC GCCGATCAGT CTGACCGCCA GAGAGTTCGA TGTCATCGCG
ACCCTCGCCC GCGAAGCGGG GCGGCCGGTC GCGAAGTCCG ACCTCGCTCG CGCGGTCTGG
GACGAAGCGG AAGATGTCGC AGGAAACCGG ATCGAGGTCT ACATCAGCGC ATTGCGCCGC
AAGGTCGACG CTCCTTTCGG TACGGAGTCG ATCGAGACGT TGCGCGGCTA CGGCTATCGG
ATCCGACAGT GA
 
Protein sequence
MPRVLIADDD QRLVRGLSEG LACEGYAVET VGDGEAALIA ADAGEFDVIV LDVQMPGRNG 
YQVVRELRRR ENWTPVLMLT AKDGEYDVAD GLDAGADDYL TKPFSYVVLL ARLRTLLRHG
AARRPVVLRV GGLEIDVAAR SVTRDGTPIS LTAREFDVIA TLAREAGRPV AKSDLARAVW
DEAEDVAGNR IEVYISALRR KVDAPFGTES IETLRGYGYR IRQ