Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1622 |
Symbol | |
ID | 9155772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1697470 |
End bp | 1698141 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003646582 |
Protein GI | 296139339 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.153936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCAGGG TGCTCATCGC CGACGATGAT CAGCGTCTCG TACGCGGGCT CAGTGAGGGG CTCGCGTGCG AGGGCTACGC CGTGGAGACG GTCGGTGACG GTGAGGCCGC ACTGATCGCG GCGGACGCCG GGGAGTTCGA TGTGATCGTC CTCGATGTCC AGATGCCCGG CCGCAACGGT TACCAGGTGG TGCGTGAGCT GCGGCGCCGG GAGAATTGGA CGCCCGTGCT GATGCTGACC GCGAAGGACG GCGAGTACGA CGTCGCGGAC GGGCTCGACG CCGGCGCCGA CGACTACCTG ACGAAACCCT TCTCGTATGT GGTCCTGCTT GCGCGACTGC GCACCCTGCT GCGGCACGGG GCGGCGCGGC GGCCGGTGGT GCTGCGCGTG GGCGGTTTGG AGATCGATGT CGCGGCCCGC AGTGTGACTC GCGATGGCAC GCCGATCAGT CTGACCGCCA GAGAGTTCGA TGTCATCGCG ACCCTCGCCC GCGAAGCGGG GCGGCCGGTC GCGAAGTCCG ACCTCGCTCG CGCGGTCTGG GACGAAGCGG AAGATGTCGC AGGAAACCGG ATCGAGGTCT ACATCAGCGC ATTGCGCCGC AAGGTCGACG CTCCTTTCGG TACGGAGTCG ATCGAGACGT TGCGCGGCTA CGGCTATCGG ATCCGACAGT GA
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Protein sequence | MPRVLIADDD QRLVRGLSEG LACEGYAVET VGDGEAALIA ADAGEFDVIV LDVQMPGRNG YQVVRELRRR ENWTPVLMLT AKDGEYDVAD GLDAGADDYL TKPFSYVVLL ARLRTLLRHG AARRPVVLRV GGLEIDVAAR SVTRDGTPIS LTAREFDVIA TLAREAGRPV AKSDLARAVW DEAEDVAGNR IEVYISALRR KVDAPFGTES IETLRGYGYR IRQ
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