Gene Tpau_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1620 
Symbol 
ID9155770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1696259 
End bp1696951 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content69% 
IMG OID 
ProducttRNA (guanine-N1)-methyltransferase 
Protein accessionYP_003646580 
Protein GI296139337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0882879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGCC TCGACGTCAT CACCATCTTC CCCGAGTACC TCGCGCCGCT GCGCCAGGCG 
CTGCTGGGCA AGGCCGTCGA CAAGGGATTG CTCGACATCG GCGTGCACGA TCTGCGGGAC 
TGGACCCACG ATGTGCACAA GGCCGTCGAT GATTCGCCCT ACGGCGGCGG ACCCGGCATG 
GTCATGAAGC CCACCGTATG GGGGCCCGCG CTCGACGACG TGTGCCCCGA CGATGCGCTG 
CTCGTGGTGC CCACTCCGGC GGGCGTTCCG TTCACCCAGG CCATGGCCCA GGAGTGGGCG 
GGCGAACAGC ACATCGTGTT CGCCTGCGGC CGTTATGAGG GCATCGACCA GAGGGTCTTC 
GACGACGCGG CCCGGCGTGT GCGGGTGGCC GAGGTATCGA TCGGCGACTA CGTCCTGATC 
GGTGGTGAGG TCGCCGTCCT CGTCATGGTC GAGGCCTTCG CCCGGCTGAT CCCGGGAGTG 
CTGGGCAACA AGCTCTCCCA TCAGGACGAC TCCTTCTCCG ACGGTGCCGG CGGTCTCCTG 
GAGGGCCCGT CGTACACCCG CCCCGAAACC TGGCGCGAAC TGACGGTGCC GCCGGTGCTG 
CTGTCCGGCG ACCACGCCAA AGTCGCCGCG TGGCGCCGCG AGCAGTCCCG GCGGCGGACT 
GCGGAGCGCC GCCCCGACCT CCTGGGTGAG TGA
 
Protein sequence
MMRLDVITIF PEYLAPLRQA LLGKAVDKGL LDIGVHDLRD WTHDVHKAVD DSPYGGGPGM 
VMKPTVWGPA LDDVCPDDAL LVVPTPAGVP FTQAMAQEWA GEQHIVFACG RYEGIDQRVF 
DDAARRVRVA EVSIGDYVLI GGEVAVLVMV EAFARLIPGV LGNKLSHQDD SFSDGAGGLL 
EGPSYTRPET WRELTVPPVL LSGDHAKVAA WRREQSRRRT AERRPDLLGE