Gene Tpau_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1613 
Symbol 
ID9155763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1690176 
End bp1691060 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003646573 
Protein GI296139330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.226824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACCT CCCGGACCCT CCTCGCCGCC GCAGTCGCCG TCGCGGTGGC CACCACCGTT 
GTGGCCTGCA GCAACACCGG CGACGACGGC TCCGGCGGCC ATGCCGGCCA CGGAGCGGCC
CCGTCGGCCT CGTCGGCCTC GTCGCCGGCC GGTGAGCACG CCGGTATGCC GGGGATGGGC
GATGACAGCC TCTCCGCCAC CCGCAACGGC TACACCCTCA CTGCGAAGGA CCCCGGCCAG
ACCGGCGGCA TCGCCTTCAC CATCACCGGG CCCGACGGCA AGCCCGTCAC CGACGTGGTG
GACGAGCAGA CCGAACCGAT GCACCTGTAC CTCGTGCGCA GCGACCTGAC CGGATTCCAG
CACGTGCACC CGAAGGCCGC CGCCGACGGT TCGTGGACCG CGCCGATCGC AGCACCCCTG
CCCGGTGACT ACCGCGTGTA CACCCAAGTG ATCCCGAAGG CGGCCGAGAA GGACGGCGCG
ATCATCCTGT CGACACCCGT TTCCGTCGCG GGCCTCGGCA AGGACGCCAC AGCGCCGCTC
CCGCCCGCCG CGGCTTCGGC CACTGCGGGC GAGTTCGGTG TGACGGTGGC CGGAACACCG
AAGGCGGGCA CCGAATCCCG GCTCTCCATC AGCATCTCCC GCGGCGGCGC CCCGGAGACC
GCACTGCAGC CCTACCTGCA GAGCTTCGCG CACGTCACCG CGATCCATGA GGGCGATCTC
GCACTCTCGC ACCTGCACCC CGTGGGCGGG CCCGCGACCG GAACCGGTGG CCCCACCGTC
GAGGTCGACG CCCTGTTCGG TACCCCCGGG AACTACCGGT TGTTCGTCCA GTTCCAGGTC
GACGGGCAGG TGCGCACCGT GCCGATCACG GTCGCGGTGT CCTGA
 
Protein sequence
MRTSRTLLAA AVAVAVATTV VACSNTGDDG SGGHAGHGAA PSASSASSPA GEHAGMPGMG 
DDSLSATRNG YTLTAKDPGQ TGGIAFTITG PDGKPVTDVV DEQTEPMHLY LVRSDLTGFQ
HVHPKAAADG SWTAPIAAPL PGDYRVYTQV IPKAAEKDGA IILSTPVSVA GLGKDATAPL
PPAAASATAG EFGVTVAGTP KAGTESRLSI SISRGGAPET ALQPYLQSFA HVTAIHEGDL
ALSHLHPVGG PATGTGGPTV EVDALFGTPG NYRLFVQFQV DGQVRTVPIT VAVS