| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1596 |
|---|
| Symbol | |
|---|
| ID | 9155746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1670567 |
|---|
| End bp | 1672009 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | 6-phosphogluconate dehydrogenase, decarboxylating |
|---|
| Protein accession | YP_003646556 |
|---|
| Protein GI | 296139313 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.963991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCA ACGACGCCAA GGCGAACATC GGTGTGGTGG GAATGGCGGT GATGGGCTCC
AACTTGGTCC GCAACCTGGC CTCCCGCGAG GGCAACACCG TGGCCATCTA CAACCGTTCG
CCGGAGAAGA CCCGGGAGGT GGTGGCCAAC CATCCCGAGG CGAACTTCGT GGCATCGGAG
TCGATCGACG ACTTCGTCGC GAGCCTGGCC ACGCCGCGCA CCGCGATCAT CATGGTGCAG
GCCGGCGCGG GCACTGATGC GGTGATCGAG CAGCTCCAAG AGCGGTTCGA GCCGGGCGAC
ATCATCGTCG ACGGCGGCAA TGCGAACTTC CACGACACCA TCGCCCGCGA AGCACGGATC
GCGCCGACTG GCATTCACTT CGTGGGCGCC GGAATCTCGG GCGGCGAAGA GGGTGCGCTC
AAGGGACCGT CGATCATGCC CGGTGGCACC CCGGAGTCGT ACGAGACGCT CGGCCCGATC
CTCGCCTCGA TCGCCGCGGT CGCCGAGGGC GAGGCCTGCG TGACCCATGT GGGAACCGAC
GGCGCAGGTC ATTTCGTCAA GATGATCCAT AACGGCATCG AATACGCCGA TATGGAGCTC
ATCGGCGAGG CGTACGACCT GCTGCGCAAT GTGGCCGGCC ACTCGCCGCA GGCGATCTCG
GACATCTTCA AGACCTGGAA CTCCGGCCCG CTCAACAGCT ACCTCATCGA GATCACCACC
GAGATCCTCA AGCACATCGA TGCCGAGACG GGCAAGCCGT TCGTCGACAT CGTCGTCGAC
CAGGCCGGGA GCAAGGGCAC CGGCGTGTGG ACCGTGCAGA CCGCGCTCGA CCTCGGAGTT
CCCGTGGGCG GCGTCGCGGA GGCCGTGTTC GGCCGGGCCG TCTCGTCCAA GCGCACGCAG
CGCGATGCCG TCCGTGCCCT GGGCATCGCG CGCCCGGACG CACCGACGGT CGACGACTCG
TTCGTCGACG ATGTGGCCAA GGCGCTGTAC GCATCGAAGA TCGTGGCCTA CGCGCAGGGT
TTCGACGCGA TCATCGCCGG CGCCGAGAAG TACGGTTGGA ACATCGATAA GGGCGCCGTC
GCCAAGATCT GGCGTGGCGG TTGCATCATC CGCGCGCAGT TCCTCAACGT GCTCGCCGAC
GCGTACGCCG AGAATCCCAA CCTGGCAACG CTTCTCGAGG CGCCGTACTT CGCACAGGCG
ATCCGCGACG GTGAGGCCGC GTGGCGCCGC GTGGTGATCA CCGCGACGCA GGCCGGCGTG
CCCGTGCCGG GGTTCGCGAC GGCGCTGAGC TACTTCGATT CGCTCAACGT CGACCGCTTG
CCCGCCGCCC TGGTGCAGGG CCAGCGCGAC TTCTTCGGGG CACACACCTA CAAGCGCGTC
GACAAGGCGG GCACCTTCCA TACGCTGTGG TCCGGTGACC GCAGCGAGGT GCAGACCGAC
TAG
|
|---|
| Protein sequence | MTSNDAKANI GVVGMAVMGS NLVRNLASRE GNTVAIYNRS PEKTREVVAN HPEANFVASE
SIDDFVASLA TPRTAIIMVQ AGAGTDAVIE QLQERFEPGD IIVDGGNANF HDTIAREARI
APTGIHFVGA GISGGEEGAL KGPSIMPGGT PESYETLGPI LASIAAVAEG EACVTHVGTD
GAGHFVKMIH NGIEYADMEL IGEAYDLLRN VAGHSPQAIS DIFKTWNSGP LNSYLIEITT
EILKHIDAET GKPFVDIVVD QAGSKGTGVW TVQTALDLGV PVGGVAEAVF GRAVSSKRTQ
RDAVRALGIA RPDAPTVDDS FVDDVAKALY ASKIVAYAQG FDAIIAGAEK YGWNIDKGAV
AKIWRGGCII RAQFLNVLAD AYAENPNLAT LLEAPYFAQA IRDGEAAWRR VVITATQAGV
PVPGFATALS YFDSLNVDRL PAALVQGQRD FFGAHTYKRV DKAGTFHTLW SGDRSEVQTD
|
|---|
| |