Gene Tpau_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1590 
Symbol 
ID9155740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp1663010 
End bp1663705 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003646550 
Protein GI296139307 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.299217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG CTGCGCCGGG GGGCGAATCC GCAGGACGAC GGGGACGGCC CCGCGCGAAT 
GATCCGCGCC GCCCCGGCGC CACCGCCGCC GACGAGATTC TCGACGCCGC TGCCGAGTTG 
TTCACCTCAC GCGGCTATGC AGGAACCTCC ACCAGAGCCA TCGCCGAGGC CGTGGGAATT 
CGGCAGGCTT CCCTGTATCA CCACTTCTCC ACCAAGGACG AGATCTTGAC TGCGCTGCTG 
GAGGCAACGG TGCAGGCGCC ACTCGCGCTC GCCCGCCAGC TCGCCGCGGC CGACGGTGAG 
CCGATCGACC GGCTGGTGCA GTTGGCGGCG TTCGATGCCG AGCAGTTGGC GACGGCCCGT 
TTCAACCTGG GCGCGCTCTA CCATCTCCCC GAGCTGGCCG GTGACGCCTT CGCCGAGTTC 
CGTCGTGATC GCGCCGAGCT GGCGGAGCAC TACCGCTCCC TCTCCGCAGC CGCCATCGGC 
GACAAGGACG ACCCCCGCAC CCTGCTCCCC TTCCGGCTGG TTGAGTCCGT CATCGGCCTC 
CGCTCCGACG GCACGATCAG CACGAACGAC GCACACTCCC AACGAGTGAT CGATACCATC 
AGCAATGCGA TTCACACCCT TGTATCAGCA TCAATGCACG CCCCCTACGC CGGCCGAGCC 
CCTCGAATGA CCCACGATCG CACTGAAATG CCCTGA
 
Protein sequence
MSDAAPGGES AGRRGRPRAN DPRRPGATAA DEILDAAAEL FTSRGYAGTS TRAIAEAVGI 
RQASLYHHFS TKDEILTALL EATVQAPLAL ARQLAAADGE PIDRLVQLAA FDAEQLATAR 
FNLGALYHLP ELAGDAFAEF RRDRAELAEH YRSLSAAAIG DKDDPRTLLP FRLVESVIGL 
RSDGTISTND AHSQRVIDTI SNAIHTLVSA SMHAPYAGRA PRMTHDRTEM P