| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1587 |
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| Symbol | |
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| ID | 9155737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1655746 |
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| End bp | 1659330 |
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| Gene Length | 3585 bp |
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| Protein Length | 1194 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_003646547 |
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| Protein GI | 296139304 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTATCTCA AGTCGCTGAC GTTGAAGGGC TTCAAGTCCT TCGCTTCGGC GACCACTCTG
CGCCTCGAAC CGGGCATCAC CTGCGTCGTC GGGCCCAACG GCTCGGGGAA ATCGAACATC
CTCGACGCCC TGCGCTGGGT GATGGGCGAG CAGGGCGCCA AGGGACTGCG CGGCGGCAAG
ATGGAGGACG TCATCTTCGC CGGTACCTCC GGCCGTGCGC CACTGGGCCG CGCCGAGGTC
ACGCTCACCA TCGACAACTC CGACGGTGCG CTGCCCATCG ACTACACCGA GGTCTCGATC
ACGCGGCGCA TGTTCCGCGA CGGCGCCGGC GAGTACGAGA TCAACGGCAC CAAATGCCGG
CTGATGGACG TCCAGGAACT GCTCTCCGAT AGCGGTATCG GCCGCGAGAT GCACGTGATC
GTCGGTCAGG GACAGTTGGC CGCGATCCTG GAGTCCAAGC CCGAGGAACG CCGCGCCTTC
ATCGAGGAGG CGGCCGGCGT GCTCAAGCAC CGGCGCCGCA AGGAGAAGGC GGTCCGCAAG
CTCGACTCGA TGCAGGCCAA CCTGGCCCGC CTCACCGACC TCACCACCGA GCTGCGGCGC
CAGCTCAAAC CACTCGGACG GCAGGCCGAG GTGGCGCGTC GCGCGCAGAC CATCCAGGCC
GATCTCCGAG ACTCGCGCCT GCGCCTCGCC GCCGACGATC TGGTGCGCCG TCGCGCCGAA
CTGGCGGACC AGTCCGGCAA CGAGGCAGCG GTCCGCGAGG AGCAGAACCT CGTGGCCGCG
CAGCTCGATG AGGCGAACGC ACTGGTCACC GAACACTCCG AGGCGGTGGC CGCGCTCGAC
CCGGCGGTGA AGGCCGCGGG AGAAGGCTGG TTCGCGCTCT CGGCGCTCGC CGAACGCGTC
TCGTCCACGG GGCGCATCGC GGCCGAACGC GCACGCCTGC TGTCCGAACC CGTACAGCAC
GCACCCGGCC GCGATCCCGA TGAGCTGGAG GCCGAGGCCG ACCGCGTCGC CGAGGAGGAG
GCAGAGCTCA TGGAGGCCCT CGAAGAGGCC GCCATGATTC TGGAGGGTGC GGCCGAGGAA
CTCGCCGAGC GGGAAGAGGC CGCGCGGGCC GCCGAGAACG CGCACATGGC CGCCGTGGCC
GCGGTCGCGG ACCGACGGGA GGGGCTCGCG CGGCTCGCGG GCCAGGTCGA GACACTGCGA
ACCCGCGCAG AATCTGTCGA CGCCGAGGCC GGCCGCCTCA CCGCCGCCAT CGCCGAGGCC
GTCGAGCGGG CCGAGACCGC CGAGACCGAA TTCGAGCAGG TGCAGGGACA GATCGCCGAA
CTCGATGCCA ATGAGGCCGG GCTGGACGAG CACCACGAGC GCAGTTCCGC CGCGCTCGTC
GCGGCGCAGG CCCGCGTCGA GGAGTTGCAG GCGGCCGAGC GCGCGGCAGA ACAGAAGGTC
GCGTCGCTGA TGGCTCGGAT CGAGGCGCTC ACCCTGAACC TGGACCGGGG CGACGGTGCC
GCCTGGGTCG TCGAGCACAT CGATGGTGTG ACCGCGGCGG TCGCCGAACG CCTGCAGATC
CGCGCCGGGT ACGAGAAGGC CGTCGCCGCC GCGCTGGGGC CGGTCGCCGA GGCCGTCGCG
GCACCGTCGG TCTCGGTCGC GTCCGCGGCA CTGGCCCGGT TGCGGGAGGC CGACGGTGGC
CGCGCCGCCC TGGTGGTGGA GGGGCTGAGC GGGCCGTCCG CGCCCGGCGG GTCGCTGCCC
GACGGTGCCG TCTGGGCGGT GGACGCCGTG ACCGCGCCGT CGGCGCTATC CGGTGTGGTC
GCGTCGGCGC TGGCGTCGGT GGTACTGGTC GATTCGGTGG ATGCCGCGGT GTCGCTGGTG
GACTCGCGGC CGGAGGTGCG GGCGGTGACG GTCGACGGTG ACGTGATCGC CCATGGAGTG
CTCACCGGCG GATCGGCGGC GCGGCAGTCC ACGCTGGAGG TGCAGAAGGC GATCGACGCC
GCGGAATCAT CGCTGGGGGA GACCCGGCGA TCGGTGGAGT CGGTATCGGC CGCGTTAGCC
GGAGCGACGG AGGATCTGGC GGCGCGGCGT GAGGTGACCG AGGCCGCGCT CGCTGCGCTG
CACGAGTCCG ATGCCCAGCT GGGTGCGATC TACGAGCAGT TGGCCCGGCT CGGACAGGCC
GCCCGCAGCG CGCGTGACGA GGCGGAACGC CTGGTGGCGC AGCGGGATCG GATCGAGTCG
TCGCGAGACG AGACGCAGGC CGCGCTGGTC GAGCACGAGG AGCGGCTGCG GCTCGCGGAG
CAGCTGCCCG AAGATTCCGT GTCCGTGGGC ACCGAGGAGC GGGACGCGGC GGTTGCGGCG
CTGTCCGCCG CGCGGAGCGT CGAGATGGAG GCGCGGCTGG CACGTCGGTC GGCGGAGGAA
CGTGCGGCCG GTGTGCGGGG TAAGGCCGAG GGATTGCGGC GGGCCGCGGC GGCCGAGCGG
TCGAACCGGG AACGGATGGA GCGTGCGGCG GCAACGCGGA TGGCTGCCGC CTCGGTGGCG
TCCGCCGTAG CGGAGAGTGC CGTGCTGGTG TCGTCGCGGC TGGATCGTGC GGTGGCTCGT
GCTGCGGCGC ATCGAGATTC GCTGGAGACC ACCCGGGCGC AGCGCGCGGG GGCGCTCGAT
GTGGCGCGGC AGGAGTCGAC GGCGCTGTCG GCGCGGCTGG CGCAGTTGAC CGATGCGGTG
CACCGCGATG AGGTGGCACG GGCGCAGGCG GCTCTGCGGA TCGAGCAGTT GGAGGAGCAG
GTGCTTACGT CGTTCGGCAT GGCGCCGGAC GATCTGGTGG CCGAGTACGG GCCCGATGTG
CTGTTGCCGC CGTCTGCGCT GGAGCTGGCC GAGTACGAGG AGGCCCGGGA ACGGGGCGAG
AACGTGGTCA AGCCGCAGGG GCTGCCGTTC GACCGGGCGG CGCAGGAGCG GCGGCTGAAG
CTGGCGGAGA AGGATCTCGC GACGCTGGGC AAGGTGAATC CGCTTGCGCT GGAGGAGTTC
GCGGCGCTGG AGGAGCGGTA CAACTTCCTC TCCACGCAGC TCGAGGACGT GAAATCGGCG
CGGCAGGATC TGCTGAACGT GGTCGACGAG GTGGACGCCA AGATCCTGCA GGTGTTCACC
GAGGCGTGGG TGGATGTGGA GCGCGAGTTC GTCGAGGTGT TCGCGACCCT GTTCCCCGGT
GGTGAAGGCC GGCTGATCCT CACCGATCCG TCGGACATGC TGACCACCGG TATTGACGTC
GAGGCGCGGC CGCCGGGTAA GAAGGTGAAG CGGCTCTCGC TGTTGTCCGG TGGTGAGAAG
TCGCTGACCG CCGTGGCGAT GCTGGTTGCC ATCTTCCGTG CCCGCCCCTC ACCCTTCTAC
GTGATGGACG AGGTCGAGGC GGCCCTGGAC GACACCAACC TGCGCCGACT GATCTCCCTG
TTCGAGCAGC TGCGCGACAA GTCCCAGTTG ATCGTGATCA CGCACCAGAA GCCGACGATG
GAGGTCGCCG ATGCGCTGTA CGGCGTCTCG ATGCGGGGCG ATGGGATCAC GCAGGTGATC
TCTCAGCGCA TCCGTGGCCA GGAGCTGGGT GTATTGCCTG TGTGA
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| Protein sequence | MYLKSLTLKG FKSFASATTL RLEPGITCVV GPNGSGKSNI LDALRWVMGE QGAKGLRGGK
MEDVIFAGTS GRAPLGRAEV TLTIDNSDGA LPIDYTEVSI TRRMFRDGAG EYEINGTKCR
LMDVQELLSD SGIGREMHVI VGQGQLAAIL ESKPEERRAF IEEAAGVLKH RRRKEKAVRK
LDSMQANLAR LTDLTTELRR QLKPLGRQAE VARRAQTIQA DLRDSRLRLA ADDLVRRRAE
LADQSGNEAA VREEQNLVAA QLDEANALVT EHSEAVAALD PAVKAAGEGW FALSALAERV
SSTGRIAAER ARLLSEPVQH APGRDPDELE AEADRVAEEE AELMEALEEA AMILEGAAEE
LAEREEAARA AENAHMAAVA AVADRREGLA RLAGQVETLR TRAESVDAEA GRLTAAIAEA
VERAETAETE FEQVQGQIAE LDANEAGLDE HHERSSAALV AAQARVEELQ AAERAAEQKV
ASLMARIEAL TLNLDRGDGA AWVVEHIDGV TAAVAERLQI RAGYEKAVAA ALGPVAEAVA
APSVSVASAA LARLREADGG RAALVVEGLS GPSAPGGSLP DGAVWAVDAV TAPSALSGVV
ASALASVVLV DSVDAAVSLV DSRPEVRAVT VDGDVIAHGV LTGGSAARQS TLEVQKAIDA
AESSLGETRR SVESVSAALA GATEDLAARR EVTEAALAAL HESDAQLGAI YEQLARLGQA
ARSARDEAER LVAQRDRIES SRDETQAALV EHEERLRLAE QLPEDSVSVG TEERDAAVAA
LSAARSVEME ARLARRSAEE RAAGVRGKAE GLRRAAAAER SNRERMERAA ATRMAAASVA
SAVAESAVLV SSRLDRAVAR AAAHRDSLET TRAQRAGALD VARQESTALS ARLAQLTDAV
HRDEVARAQA ALRIEQLEEQ VLTSFGMAPD DLVAEYGPDV LLPPSALELA EYEEARERGE
NVVKPQGLPF DRAAQERRLK LAEKDLATLG KVNPLALEEF AALEERYNFL STQLEDVKSA
RQDLLNVVDE VDAKILQVFT EAWVDVEREF VEVFATLFPG GEGRLILTDP SDMLTTGIDV
EARPPGKKVK RLSLLSGGEK SLTAVAMLVA IFRARPSPFY VMDEVEAALD DTNLRRLISL
FEQLRDKSQL IVITHQKPTM EVADALYGVS MRGDGITQVI SQRIRGQELG VLPV
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