Gene Tpau_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1556 
Symbol 
ID9155706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1624513 
End bp1625844 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content68% 
IMG OID 
Productdiaminobutyrate/2-oxoglutarate aminotransferase 
Protein accessionYP_003646516 
Protein GI296139273 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACTC TGACCGAGGA AAACGTCCGA ACCGAGGACT TCCCCGCACA ACGCGAGGTG 
AGCAGCGGGC AGGGCTTCGA CGCCGATATC TTCGCTGACC GCGAGTCCCA GGTCCGCAGC
TACTCCCGCT CCTGGCCCGC CGTCTTCGAC AAGGCCGAGG GCGCCTGGTT GCAGGACACC
GAGGGCAACC GCTACCTCGA CTTCTTCGCC GGCGCGGGCG CGCTGAACTA CGGCCACAAC
AACCCGATCC TGCGCGACGC ATTGGTCGAC TACATCACCA GCGGCCGGAT CACCCACGGC
CTCGACATGT CGACCGTGGC CAAGGGCGAG TTCCTGCAGA CCTTCCAGGA CAAGATCCTC
ACCCCGCGCG GACTCGACTA CAAGGTGCAG TTCCCCGGCC CGACCGGTGC CAACACCGTG
GAGGCGGCGC TGAAGCTGGC CCGCAAGGTG ACCGGCCGCG AGTCGGTGGT CAACTTCACC
AACGCTTTCC ACGGCATGAC GCTGGGCGCT CTGTCGGTGA CCGGTAACTC GATGAAGCGC
GCGGGCGCCG GTGTACCGCT GGTGCATTCG ACCCCGATGC CCTTCGACAA CTACTTCGAC
GGCACGGTCC CGGACTTCTC CTGGTTCGAG CGCCTGCTGG AGGATTCGGG CAGCGGTCTG
AATCTGCCTG CGGCGGCGAT CGTGGAGACC GTGCAGGGCG AGGGCGGCGT CAACGTCGCC
CGCGCCGAGT GGCTCCGCGC ACTGGCCGAT CTGCTCAAGC GCCACGACAT CCTGCTCATC
GTCGACGATG TGCAGATGGG CTGCGGCCGC ACCGGTCCGT TCTTCTCGTT CGAGGAGGCC
GGGATCACCC CGGATATCGT GACCCTGTCG AAGTCGATCG GCGGCTACGG CCTGCCGATG
GCGCTCACGC TGTTCAAGCC GGAGCTCGAC GTGTGGCTCC CCGGTGAGCA CAACGGCACC
TTCCGCGGCA ACAACCCCGC GTTCGTGACA GCCAAGGCCG CTATCGATGC GTACTGGTCG
GATGACACCC TGGAGCACGA GACCCTGCGC AAGGGCGAGG TCATCGAGCG CCGTTTCCAG
GCGCTGTGCG AGGCGTACCC GGACGACCTG ACCACCCGCG GTCGCGGCCT GGTGCAGGGC
CTGTCGTTCA CCACCCCGGA GAAGGCGGGC GAGGCGTGCG CCGCCGCCTA CCGGTTGGGC
CTCCTCGCCG AGTCCTCCGG CCCGCGCGAC GAGGTCGTCA AGCTGCTCCC CCCGCTCACC
ATCACCGACG GTGAGCTGGA GCAGGGCCTC GATCTTCTCG AGCAGGCCGT CGCGGAGGTG
CTGTCGCGAT GA
 
Protein sequence
MSTLTEENVR TEDFPAQREV SSGQGFDADI FADRESQVRS YSRSWPAVFD KAEGAWLQDT 
EGNRYLDFFA GAGALNYGHN NPILRDALVD YITSGRITHG LDMSTVAKGE FLQTFQDKIL
TPRGLDYKVQ FPGPTGANTV EAALKLARKV TGRESVVNFT NAFHGMTLGA LSVTGNSMKR
AGAGVPLVHS TPMPFDNYFD GTVPDFSWFE RLLEDSGSGL NLPAAAIVET VQGEGGVNVA
RAEWLRALAD LLKRHDILLI VDDVQMGCGR TGPFFSFEEA GITPDIVTLS KSIGGYGLPM
ALTLFKPELD VWLPGEHNGT FRGNNPAFVT AKAAIDAYWS DDTLEHETLR KGEVIERRFQ
ALCEAYPDDL TTRGRGLVQG LSFTTPEKAG EACAAAYRLG LLAESSGPRD EVVKLLPPLT
ITDGELEQGL DLLEQAVAEV LSR