Gene Tpau_1539 details

Gene Information

• Locus tag: Tpau_1539
• ID: 9155689
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1609952
• End bp: 1610680
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 71%
• Product: Protein of unknown function DUF2174-like protein
• Protein accession: YP_003646501
• Protein GI: 296139258

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.639401
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGTCGG CCAAGTCCTC GCTGTCCGTT CGCAAGCTGA CGGACGACGA GCTGCGCGGC 
AGGGGACGCA CCGTCGCCAC CGCACCCCCG CCGAAGTTGG ACTTCGCCGA GACCGAGCCG 
GAGGCCTACG GCGGGGGAGC CTTCGACAGC GTCGGCCACG TCGATGTGGT GCACGTCCCC 
GAACGCTCCT ATCTGGGCGT CACCACCTCC GGCAGCCCGC GCACCTCGGA GGACTACCGA 
GTGGCCGCTG AGGCCCTGTT CGCCGCCGCC TACGGCGTCA AGGTGCGCAA CAAGGCCCAG 
GCGCGGCGCG GAACCCCCGG CGCCGACGAC GCCGTCCGTT CCGACTTCGT GGTGCCGCCG 
CTGGAGCGCC TGCGGGGCGA CCTCACGGCG CACACCACCG ACGAGGCCCA ATGGACACTG 
CTGCTGCGCC GTCCTGCCTG GATCGACGAT GCGGAGGTCG GCGACGTCCT CGAGCAGCTC 
GAGGTCACCA AAGGCCTGAA GAACCTGACC CGGGTCCGCT GTTTGGAACT GCCGCCCGCG 
TCCTATCTCC AGACCCGGGT GGACGGCCGC TGGTCGGTGG CCCTGACGCC CACGTCGAAG 
GCTTTCGATG TGCAGCTGCG TGAGCGCGGC CTGACGGCCG TCGAGGGTTC CTGGCACGAG 
GTGTGCCTCG GCGAGCCCGG CGCGCCGGTG GGGCAGAGCA GCTACCTGCT GCGCCGCCGC 
CTCGCCTGA 

 

Protein sequence

MTSAKSSLSV RKLTDDELRG RGRTVATAPP PKLDFAETEP EAYGGGAFDS VGHVDVVHVP 
ERSYLGVTTS GSPRTSEDYR VAAEALFAAA YGVKVRNKAQ ARRGTPGADD AVRSDFVVPP 
LERLRGDLTA HTTDEAQWTL LLRRPAWIDD AEVGDVLEQL EVTKGLKNLT RVRCLELPPA 
SYLQTRVDGR WSVALTPTSK AFDVQLRERG LTAVEGSWHE VCLGEPGAPV GQSSYLLRRR 
LA