Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1532 |
Symbol | |
ID | 9155682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1603353 |
End bp | 1604009 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | channel protein, hemolysin III family |
Protein accession | YP_003646494 |
Protein GI | 296139251 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.104876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGTCG TCGGTGTGCC CGAGGTCAAA CCGCGGTTGC GCGGTGTGAT TCACCAGTTC GGCGCGCTCG GGGCGATCGC TCTGGGCGTC CCGCTGGTGA TCGCCGGCTT CCGGCAATCC GCTGGCGCCG GCCTCGCCCT GCTGGTCTAC GCGATCACCG TGTTCGGCGT GTTCGGGGTG AGCGCGGCCT ACCATCGCGG ACGCTGGACC GACGCGCAGC GCATCTGGAT GAAGCGCGCC GACCACTGCA TGATCTTCGT CTTCATCGCC GGCAGCTACA CGCCGATCGC GGTGCTGGCA TTGCCGTCCG GCGTCGCCCG GTGGGTACTC GCGGTCGTCT GGGGCGGCGC GCTCGCCGGC GTCGCGCTGA AACTGCTGTG GCCGCACGCA CCGCGCTGGG TGGGCGTCCC GCTGTACATC GCCCTCGGCT GGGTCGTGGT GGCCGTCGCG GGCGATCTGG TCGACGGTGC GGGGTGGACG GCCTCGGCAC TGCTCGCCAT CGGTGGCGTG CTCTACAGCG GCGGAGCGGT GCTCTATGCC ACTCGCTGGC CCGACCCCTG GCCCGGCGTG TTCGGGCATC ACGAGTTCTT CCACGCCGCC ACCGTGGTCG CGGCCCTGTG TCATTACGCG GCGATGTGGA TCATCCTGCT CCGATGA
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Protein sequence | MTVVGVPEVK PRLRGVIHQF GALGAIALGV PLVIAGFRQS AGAGLALLVY AITVFGVFGV SAAYHRGRWT DAQRIWMKRA DHCMIFVFIA GSYTPIAVLA LPSGVARWVL AVVWGGALAG VALKLLWPHA PRWVGVPLYI ALGWVVVAVA GDLVDGAGWT ASALLAIGGV LYSGGAVLYA TRWPDPWPGV FGHHEFFHAA TVVAALCHYA AMWIILLR
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