Gene Tpau_1496 details

Gene Information

• Locus tag: Tpau_1496
• ID: 9155646
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 1564266
• End bp: 1564847
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 73%
• Product: peptidylprolyl isomerase FKBP-type
• Protein accession: YP_003646459
• Protein GI: 296139216

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0238853
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGATGCGC GGTTCACCAG GTTCGCGATA GCAGCGGGAA CGGTCCCGCT GCTCCTCGTC 
GGGTGCGGGG CACCCTCCCC CGGATCCGCC GAGCCTGAGC GGTCCGCATC GAGCGATCCC 
GTCGCGGACT GCCCGTCGGC CGCGCCGGCG GGCGTAGCCA AGGCGGACGT GGTCTTCCAC 
GGCGATGCCG GCCGCGCCCA GATCGTCGCC CCCACCCCGA CGACGGCGCC GCGGGTCGCG 
ATCACCACGC CCTTCCGCGT CGATCGCACC CAGGTTCTGC GGGTCCACGG TGGGCACGGC 
CCGGCACTCG CCGACAACGC CGTGGTCACC GTCTGCTACC AGGGCGTCAA CGGGCGCACG 
GGCGATGTCT TCGACGACTC CTTCGTGCGG TCGACCTCCG CCGAATTCGC CCTCACCGAC 
GTGGTCCCGG GCTTCCGCAA GACGGTCGCC GGCCAACAGG TCGGTGCCAC CGTGGTCTCC 
GCGGTCACGG GCGCCGACGC CTACCCGTCC GGCGAGGCCG AAGCCGGGAT CGAACCCGGC 
GACACCCTCG TCTTCACCGT CGTGGTGCTG TCCGCGAGCT GA 

 

Protein sequence

MDARFTRFAI AAGTVPLLLV GCGAPSPGSA EPERSASSDP VADCPSAAPA GVAKADVVFH 
GDAGRAQIVA PTPTTAPRVA ITTPFRVDRT QVLRVHGGHG PALADNAVVT VCYQGVNGRT 
GDVFDDSFVR STSAEFALTD VVPGFRKTVA GQQVGATVVS AVTGADAYPS GEAEAGIEPG 
DTLVFTVVVL SAS