Gene Tpau_1483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1483 
Symbol 
ID9155633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1551017 
End bp1552387 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content66% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003646449 
Protein GI296139206 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACGG ATACCGTCTC CGCGCCGTCG ATCGCGGCGC GCCTGGACCG CCTGCCCATG 
ACCAGGCTCC ATTTCGCCGC GGTGGGTGTG ATCGGACTCG GGCTGTTCTT CGACCAGTAC
GAGAACTTTC TCGCTGCCAC CATCGCGACG GTTCTGCGCC GCGATTTCGC CCTCGGCTCC
GATCAGCTCA AGATCCTGTT GGCCTCGGCG TTCATCGGTC AGTTCCTCGG TGCCCTGTTC
ATGGGCCGGC TCGCGGACCG GGTGGGGCGC CGGCGCGCCT TCATGATCAA CCTGGCGATC
TACTCCGCCA TGTCGCTCGC CGGTGCGTTC AGCCCGAACG TAGCCTTCCT GGTGGTCACC
CGGTTCGTCG CTGGCATCGG GATCGGGGGA GAGTTCGCCC TTGCCGACTC GTACCTGTCC
GACCTGCTGC CCAAGGACGT CCGCGGTAAG TACATCTCGC TGGCCTACAC GGTGTCCTTT
CTCGGCGTGC CGGTGGTCGG TTTCGCAGCC CGGTGGCTGA CGCCGCAGAC CTTCCACATC
GGCTCCGTCG AGGTGGACGG CTTGCGGCTG CTCTTCGTGT TCGGTGCCCT GGGGTCGTTC
CTGGTGTGGC TGGTGCGACG AGGTCTGCCG GAATCGCCGC GCTGGCTGGA GGCGCAGGGC
CGCTACGGCG AGGCCGACGC CATCGTCCGG CGGCTGGAGA GTCAGGCGGT CGCGGAGGGC
AAGGTCCTCG ATGATCCCGA TCCGAGTCTG AGGCCCGTCA AGGCCCGTTC GATCGCGATC
CATGATCTGT TCCGCCCGCC GTACCGGCGG CGCACCGTGA TGCTGTGGAT CGTCTCCGCC
CTGGAGGTGT TCGGCTACTA CGGATTCGGC ACCATCGCGC CGCTGGTGCT GGTGGCCAAG
GGATATTCGA TCCAGACCTC CTTGTTGTTC GTGGCGTTGT CGTACATCGG GTACCCGCTC
GGTGCCGCGC TCGCCATGCC GATCGTGGAA CGGGTGGAGC GCAAGCATCT CGTGATCGGA
TCTGCCGGTC TGATGGCGGT TTTCGGGCTG TGGTTCGGAT TCGCACCCAC TCCCACACAG
ATCGTGATGG CCGGATTCCT GTATACGCTG GCGTCGAACC TGTTCTCGAA CGCCTACCAC
GTGTACCTCG CCGACTCGTA CCCGACGGCG ATCCGCGGTA CCGCCGCGGG AGCGGCGTAC
TCGCTCACCA AACTGGTGAC GGCTTTCCTT CCGTTCATTC TGCTTCCGAT CCTCGACGAG
CATGGCAGCG TGTGGGTGTT CGCGGTGGTG GCCGCCGCGA TGGTTGGGCT GATGATCACC
GTGGCCGTGC TCGGGCACCG GAGCACGGGC CGTTCGGCCG ACGCGATCTA G
 
Protein sequence
MSTDTVSAPS IAARLDRLPM TRLHFAAVGV IGLGLFFDQY ENFLAATIAT VLRRDFALGS 
DQLKILLASA FIGQFLGALF MGRLADRVGR RRAFMINLAI YSAMSLAGAF SPNVAFLVVT
RFVAGIGIGG EFALADSYLS DLLPKDVRGK YISLAYTVSF LGVPVVGFAA RWLTPQTFHI
GSVEVDGLRL LFVFGALGSF LVWLVRRGLP ESPRWLEAQG RYGEADAIVR RLESQAVAEG
KVLDDPDPSL RPVKARSIAI HDLFRPPYRR RTVMLWIVSA LEVFGYYGFG TIAPLVLVAK
GYSIQTSLLF VALSYIGYPL GAALAMPIVE RVERKHLVIG SAGLMAVFGL WFGFAPTPTQ
IVMAGFLYTL ASNLFSNAYH VYLADSYPTA IRGTAAGAAY SLTKLVTAFL PFILLPILDE
HGSVWVFAVV AAAMVGLMIT VAVLGHRSTG RSADAI