| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1472 |
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| Symbol | |
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| ID | 9155622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1538394 |
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| End bp | 1541516 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_003646438 |
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| Protein GI | 296139195 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.800895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGACA CACCGTCGCC GGAAGAACAG AACAACGAAG CTCGGGAGGA GTTCCCGCAG
AAGTTGCGCG TGCACGCGCT CGCTCGTCTG TTGGGACTGA CCAGCAAGGA GGTGCTCGCG
CACCTCGGTG ACCTCGGTTT CGTCGCGCGC AGCGCGCACT CGAGCATCGA TCGCAGCGCC
GCCGAGCGGG TGCGCGACCG GATCGCCGAA CTCGCGGCCG CCCCCGATGG CGCCGCCACC
CCCGAGGCGC CCGCGGAGAC CGAGGCCTCG CACGGGTCAC CAGCCGAGAC TCCGGCCCCC
GCCGACGAGA CTCCGTCGTT GTTCTCCGCG CTCGCCGCCC CGGCCCCAGC CGCCGAGTCC
GCGACCACGC AGGCAGTCGA CACCACGGTT CCGCTGTTCC TGCAGCCCGA GGCCGACGCC
GCGCCGCGTC GCCGCACCCG CAGCCGGGCC AAGGCCGAGC CGAAGAACGA TGAGGTCACC
GAGGCGTCCG ATCAGGCCGC TTCCGAGGCG CAGCCGGCCG CGACGGGCGA ACAGGACGCC
GCGGATGCCG ACGCCGCTAA CGGGGCCGAC GCAACCGAGG CGCAGAGCGA TGCCCCGTCG
GGCGAGAGCA CCGACGATGA CAACGGCGGC AACCGCCGAC GTCGCCGCGG CCGCCGCGGA
CGCGGCCGGG GTCGGGGCGA GAACGCCGAT GAGCAGGACT CCGCGAACGA CGAGGATGCC
GCCGACGCCA CGCCCGAGAA GGCGGATCAG CCCCCCGCGC CGGAGAAGGC CGACGGTGAG
GACTCGACCG CCGAGAACAA GGACGACGAG TCCGAGGGTG ACGACGTCGA GGATGTCACC
GACGGCAGCT CGCGTCGCCG TCGCCGTCGC CGTCGCCGCC GCGGTGGGGG AGACGACGCC
GACAGCGCCG CCAGCGACGA TCCGCCGAAC ACCGTGGTGC ACGAGCGCGA ACCCCGGCAG
AAGTCACGGC GCGACGAGGT GCGCGGCATC AGCGGTTCCA CGCGCCTGGA GGCCAAGCGA
CAGCGCCGCC GCGACGGCCG CGATACCGTG CGCCGCCGCC CGCCGATCCT CACCGAATCC
GAGTTCCTGG CTCGCCGCGA GGCCGTCGAC CGCGTGATGG TGGTGCGCGA ACGCACCAAG
GTCGGGCCGT CGGAAGGCCA GGACGGCCAC ACCGTGCCGC ACCCGCAGGA CTACACGCAG
GTCGCCGTGC TCGAAGACGG TGTGCTCGTC GAGCACTTTG TCACCTCGTC CAGTTCGGCG
TCGATGGTGG GCAACATCTA CCTCGGCCGC GTGCAGAACG TGCTGCCCTC GATGGAGGCG
GCCTTCGTCG ACATCGGCCG TGGCCGCAAC GGCGTCCTGT ACGCCGGCGA GGTGAACTGG
GACGCTGCCG GACTCGATGG CAACGCCCGC AAGATCGAGC AGGCGCTCAA GCCCGGCGAC
CAGGTTCTCG TTCAGGTCTC CAAGGATCCG GTGGGCCACA AGGGCGCCCG CCTGACCACG
CAGATCTCGC TGGCCGGGCG CTTCCTGGTG TACGTGCCCG GTGGCGGCTC CGCGGGTATC
TCCCGCAAGC TCCCCGACAC CGAGCGCAAG CGCCTGAAGG AGATCCTCAA GGAGATCGTC
CCGGCCGATG CGGGCGTGAT CATTCGCACC GCGTCGGAGG GCGTGAGCGC CGAGGAGCTG
GCGGGTGATG TCTCGCGGTT GCAGGCGCAG TGGGCCGAGA TCGAGGAGGC CTCCAAGGCG
AAGGGGGTGC GCGCGCTCTA CGAGGAGCCC GACCTCCTGG TCAAGGTGGT GCGCGACCTG
TTCAACGAGG ACTTCAGCAA GCTCGTCATC GAGGGCGGCA CCGCCTGGGG CACCGTGGAG
AAGTACGTCT CCACGGTCGC TCCCGACCTG ATGCCCCGCG TCGAGCGGTT CGAGAAGCGG
CACGCCGACG CCCCCGATGT CTTCGCGGCC TACCGGATCG ACGAGCAACT GGCCAAGGCC
CTCGACCGCA AGGTGTGGCT GCCCTCGGGC GGCACCCTGG TGATCGACCG CACCGAGGCC
ATGACCGTGG TCGACGTGAA CACCGGCAAG TTCACCGGCT CCGGCGGCAA CCTGGAGGAG
ACGGTCACCC GTAACAACCT CGAGGCGGCC GAGGAGATCG TGCGGCAGAT GCGCCTGCGC
GACATCGGCG GCATGATCGT CGTCGACTTC ATCGATATGG TCCTGGAGTC GAACCGCGAC
CTGGTGTTGC GGCGCCTGAC CGAGGCCCTG GGCCGCGATC GCACTCGCCA TCAGGTCTCC
GAGGTCACCT CGCTGGGCTT GGTGCAGATG ACCCGCAAGC GGATCGGCAC CGGCCTCGTC
GAGGCCTTCT CCACGCCGTG CCAGGCCTGC TCGGGCCGCG GCATCATCAT CCACGCGGAT
CCGGTCGAGA CCGCGGGTGG CGACGACTCC GGTCGTTCGG GCGAGAAGTC CGAGGGCAGC
CGCAAGAAGC GCAAGCGTTC GAAGTCCGAC GGTGCGCAGC AGCCCGTCGT CGCGCCGAAG
GACGACAAGG CGGCCCATAA GAGCGAGCAC CCGATGTTCA AGGCGATGGC GCAGCATCAC
GACGACGAGG ACTCCACTCC CGTCGACGGT GCGCAGGACG GCGAGGCGGT GGCCGAGGCG
CCCGCCGACG CGGGGAAGCC GGCGGAGCAG AGCACCGAGC CCACGCAGGA ACCCAAGCGC
GAGCGTCGTC GTCGGCGTGA GCCGAAGCAG GACGCGCCGA GCCAGGCGGC GACGATCGAG
TCGGCGCCGA CCGAGACCGC GCCGGCCCCG CAGGCCGCCG CCGAGTCGAC CCCGGCCGCA
CCGGTGGCCG CTGAGCCGGC GGCTGCGGAA CCGGCCTCCG CCGTGGCGCC GTCGGCACCG
CGTCGCCGCC GGGTCGCCCG CAAAGCGCCC ACCACCACGT CGGCGGCGGC ACAGACGATC
GTCGTCGACC TGGCTCAGGA GGCCCCGGGT GCACCGGCGG TCACCGCTCC GGCGGCAGAC
GGTGCGGGGG AGACCGCCGC CGAACCCGCC CGTAAGCGAG CGCGCCGCCG CGCGGCCGCC
CGCCCGGCGG GCCCTGCGGC CGGTGGAAGT GACACTGCTG ACAAGACGGA CCAGCCGGTT
TGA
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| Protein sequence | MADTPSPEEQ NNEAREEFPQ KLRVHALARL LGLTSKEVLA HLGDLGFVAR SAHSSIDRSA
AERVRDRIAE LAAAPDGAAT PEAPAETEAS HGSPAETPAP ADETPSLFSA LAAPAPAAES
ATTQAVDTTV PLFLQPEADA APRRRTRSRA KAEPKNDEVT EASDQAASEA QPAATGEQDA
ADADAANGAD ATEAQSDAPS GESTDDDNGG NRRRRRGRRG RGRGRGENAD EQDSANDEDA
ADATPEKADQ PPAPEKADGE DSTAENKDDE SEGDDVEDVT DGSSRRRRRR RRRRGGGDDA
DSAASDDPPN TVVHEREPRQ KSRRDEVRGI SGSTRLEAKR QRRRDGRDTV RRRPPILTES
EFLARREAVD RVMVVRERTK VGPSEGQDGH TVPHPQDYTQ VAVLEDGVLV EHFVTSSSSA
SMVGNIYLGR VQNVLPSMEA AFVDIGRGRN GVLYAGEVNW DAAGLDGNAR KIEQALKPGD
QVLVQVSKDP VGHKGARLTT QISLAGRFLV YVPGGGSAGI SRKLPDTERK RLKEILKEIV
PADAGVIIRT ASEGVSAEEL AGDVSRLQAQ WAEIEEASKA KGVRALYEEP DLLVKVVRDL
FNEDFSKLVI EGGTAWGTVE KYVSTVAPDL MPRVERFEKR HADAPDVFAA YRIDEQLAKA
LDRKVWLPSG GTLVIDRTEA MTVVDVNTGK FTGSGGNLEE TVTRNNLEAA EEIVRQMRLR
DIGGMIVVDF IDMVLESNRD LVLRRLTEAL GRDRTRHQVS EVTSLGLVQM TRKRIGTGLV
EAFSTPCQAC SGRGIIIHAD PVETAGGDDS GRSGEKSEGS RKKRKRSKSD GAQQPVVAPK
DDKAAHKSEH PMFKAMAQHH DDEDSTPVDG AQDGEAVAEA PADAGKPAEQ STEPTQEPKR
ERRRRREPKQ DAPSQAATIE SAPTETAPAP QAAAESTPAA PVAAEPAAAE PASAVAPSAP
RRRRVARKAP TTTSAAAQTI VVDLAQEAPG APAVTAPAAD GAGETAAEPA RKRARRRAAA
RPAGPAAGGS DTADKTDQPV
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