| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1463 |
|---|
| Symbol | |
|---|
| ID | 9155613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1526136 |
|---|
| End bp | 1527413 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent Clp protease, ATP-binding subunit ClpX |
|---|
| Protein accession | YP_003646429 |
|---|
| Protein GI | 296139186 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.118814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGGA TCGGGGACGG CGCGGACCTG CTCAAGTGCT CCTTCTGCGG GAAGAGCCAG
AAGCAGGTCA AGAAGCTGAT CGCCGGCCCC GGCGTGTACA TCTGCGACGA GTGCATCGAC
CTCTGCAACG AGATCATCGA AGAGGAACTG GCCGAGTCCA GCGATGTGAA ACTGGACGAG
CTGCCCAAGC CCGTCGAGAT CCGCGACTTC CTGGACAACT ACGTCATCGG CCAGGACTCC
GCCAAGCGGA ACCTCGCCGT GGCGGTCTAC AACCACTACA AGCGCATCCA AGCGGGCGAG
CGCAAGGACG CCCGCGGCGA GAGCGTGGAG CTGGCGAAGT CCAACATCCT CATGCTCGGT
CCCACCGGCT GCGGCAAGAC CTACCTGGCG CAGACCCTGG CGAAGATGCT CAACGTGCCC
TTCGCGATCG CCGATGCCAC CGCCCTCACC GAGGCCGGTT ACGTGGGCGA AGACGTGGAG
AACATCCTGC TCAAGCTGAT CCAGGCCGCC GACTACGACG TCAAGCGCGC CGAGACCGGC
ATCATCTACA TCGACGAGGT CGACAAGATC GCCCGCAAGA GCGAGAACCC GTCGATCACG
CGCGATGTCT CGGGCGAGGG TGTGCAGCAG GCCCTGCTGA AGATCCTCGA GGGCACCCAG
GCCTCGGTGC CCCCGCAGGG CGGCCGCAAG CACCCGCACC AGGAGTTCAT CCAGATCGAC
ACGACGAACG TGCTGTTCAT CGTGGCCGGC GCCTTCGCCG GGCTGGAGAA GGTGGTGGGT
GACCGGATCG GTAAGCGCGG CCTGGGCTTC GGCACCGAGG TCCGTTCCAA GGCCGAGGTC
GATACCGTCG ATCACTTCGC CGATGTGCTG CCCGAGGATC TCATCAAGTT CGGTCTGATC
CCCGAGTTCA TCGGTCGCCT CCCGGTGATC GCGTCGGTGA GCAACCTCGA CAAGGAATCG
CTGGTCTCGA TCCTCTCCGA GCCCAAGAAC GCGCTCGTCA AGCAGTACGA GCGGCTGTTC
GAGATGGACG GTGTGGAGCT CGAATTCGAC GAGGACGCGC TCGGTGCCAT CGCCGATCAG
GCGATCCTGC GCGGCACCGG CGCTCGTGGC CTGCGCGCGA TCATGGAAGA GGTGCTCAAC
CCCGTCATGT TCGACATCCC GTCGCGCGAT GACGTGGCGA AGGTGGTCGT GACGGGCGAG
ACGGTGCGCG ACAACGTGCT TCCGACCATC GTTCCCCGCA AGCGCTCTCG CGACGAGCGC
CGCGACAAGA GCGCGTAG
|
|---|
| Protein sequence | MARIGDGADL LKCSFCGKSQ KQVKKLIAGP GVYICDECID LCNEIIEEEL AESSDVKLDE
LPKPVEIRDF LDNYVIGQDS AKRNLAVAVY NHYKRIQAGE RKDARGESVE LAKSNILMLG
PTGCGKTYLA QTLAKMLNVP FAIADATALT EAGYVGEDVE NILLKLIQAA DYDVKRAETG
IIYIDEVDKI ARKSENPSIT RDVSGEGVQQ ALLKILEGTQ ASVPPQGGRK HPHQEFIQID
TTNVLFIVAG AFAGLEKVVG DRIGKRGLGF GTEVRSKAEV DTVDHFADVL PEDLIKFGLI
PEFIGRLPVI ASVSNLDKES LVSILSEPKN ALVKQYERLF EMDGVELEFD EDALGAIADQ
AILRGTGARG LRAIMEEVLN PVMFDIPSRD DVAKVVVTGE TVRDNVLPTI VPRKRSRDER
RDKSA
|
|---|
| |