| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1460 |
|---|
| Symbol | |
|---|
| ID | 9155610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1523149 |
|---|
| End bp | 1524534 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_003646426 |
|---|
| Protein GI | 296139183 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.524042 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAGCA CCGTCGAGCA GCTGAGCCCG ACTCGCGTCC GCCTGAGTGT CGAGGTTCCC
TTCGACGAGC TCGCGCCCGA TTTCGAGCGC GCGTACGAGG CCCTCGCCCA GCAGGTGAAC
ATCCCCGGCT TCCGCAAGGG CAAGGCGCCC GCGAAGCTGA TCGAGGCGCG CGTCGGCCGC
GACGCCGTGC TCTCGCAGGT GATCAACGAC GCGCTGCCCG GCAAGTACAG CCAGGCCGTG
CTCGACTCGG AGGTCAAGGC CCTGGGCCAG CCCGAGATCG ACATCGAGAA GCTCGAGTAC
GGCGAGGCCC TGTCCTTCAC CGCCGAGGTC GACGTGCGCC CCGAGGTCAC CCTGCCCGAG
TACTCGGGCA TCGAGGTCGA GGTCCCCAGC CTCGAGGTCA CCGACGCCGA TGTCGAGGAG
CAGCTCGATG GCCTGCGTGC CCGCTTCGGC ACGCTCAAGG GCGTCGACCG TCCCGTCCAG
GAGGGCGACT TCGTCACCAT CGACCTGTCG GCGACCGTCG ACGGTAAGGA CGTCGAGGAC
GCCAAGACCA CCGGCCTCTC GCACGAGGTG GGCTCGGGCA ACCTGATCGA CGGCCTCGAT
GAAGCCATCG TCGGCCTCAA GTCCGGCGAG TCCAAGCAGT TCACGACCAA CCTCGTCGCC
GGCGAGTTCG CCGGCCAGGA GGCCGAGGTG ACTGTCACCG TCGACTCGGT CAAGGAGCGC
GAGCTGCCCG AGCTCGACGA CGAGTTCGCC CAGCTGGCCA GCGAGTTCGA CACCGTCGAT
GAGCTGCGGG ACGACCTGCG TGGCCGGGTC GAGCAGAACA AGAAGCTGAG CCAGGCCGCC
GAGATCCGCG ACGCCGTGCT GGAGAAGCTC ATCGAGGCCA CCGAGATCCC GCTGCCCGAA
GCCGTGGTCA AGGAGCAGGC GGACGCCAAC GTGCACGATG TGCTGCACCA GGTGGGCCAC
AACGAGGAGC TGCTCGAGAC CGCGCTCAAG GCGCAGGGCA CCAGCCGCGA GGAGTTCGAG
AAGCAGGCGC AGGAGTCCGC CGAGAAGCAG GTCAAGGTGC AGCTGCTGCT CGATGCCATC
GCCGACGCGC AGGACGTGCA GGTCGATCAG CAGGAGCTGC AGGAGCACAT CCTGTTCCAG
TCGCAGCGCT ACGGCATGCA GCCGCAGGAG TTCATCGCGC AGATCCAGCA GGCCGGCCAG
CTGCCCGCTC TGTTCCAGGA GGTCCGCCGC GGTAAGGGCC TCGCCGATGT GGTGCTCGAG
GTGAAGGTCG TGGACGCCGA CGGCAACCCC GTCGATACCA AGGCGCTGTT CGACCGCGAG
GACGCCGACG AGGCGCCCGA GGCCGACTCC GCCGAGGCCG AGTCCACCGA GGCCGACGAG
AAGTAG
|
|---|
| Protein sequence | MKSTVEQLSP TRVRLSVEVP FDELAPDFER AYEALAQQVN IPGFRKGKAP AKLIEARVGR
DAVLSQVIND ALPGKYSQAV LDSEVKALGQ PEIDIEKLEY GEALSFTAEV DVRPEVTLPE
YSGIEVEVPS LEVTDADVEE QLDGLRARFG TLKGVDRPVQ EGDFVTIDLS ATVDGKDVED
AKTTGLSHEV GSGNLIDGLD EAIVGLKSGE SKQFTTNLVA GEFAGQEAEV TVTVDSVKER
ELPELDDEFA QLASEFDTVD ELRDDLRGRV EQNKKLSQAA EIRDAVLEKL IEATEIPLPE
AVVKEQADAN VHDVLHQVGH NEELLETALK AQGTSREEFE KQAQESAEKQ VKVQLLLDAI
ADAQDVQVDQ QELQEHILFQ SQRYGMQPQE FIAQIQQAGQ LPALFQEVRR GKGLADVVLE
VKVVDADGNP VDTKALFDRE DADEAPEADS AEAESTEADE K
|
|---|
| |