| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1450 |
|---|
| Symbol | |
|---|
| ID | 9155599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1514893 |
|---|
| End bp | 1515936 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_003646416 |
|---|
| Protein GI | 296139173 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.320016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCAC CGTCGCGCGT CTCCGGCCTG CGCCCGGCCA CCCTGATCAT CGCGGTGATG
GTGCTGGTGG CATCCACCGT GCTCGGGCTC CTCGTGGGTG CGGCGGATCT GCCGCTGCGC
GGGGTTCTGT GGGAGCTCGC AGATCGATTG CCCTTCGTGC ACGTTGATTC CGGACTCTCG
CGATTGGATC GGAACATACT CATCGAGGTG CGGCTACCGC GGGTTCTGGC AGCGGCGCTC
GTGGGCGGTC TGCTCGCTAT CGCGGGCGCC GGCTACCAGG GGGTGTTCCG GAACCCGCTC
GCCGACCCGT ACCTGCTGGG CGCCGCGGCG GGTGCCGGCG TGGGAGCCAC GGCGACGATC
GCGCTGCTCC CCGGTAACCC GGCGGCGACG GTCCCGGTGG CCGCGTTCGT CGGCGCACTC
ACCGGAGTGG TACTGGCGTA CCTGCTGGGG AGTACAGCTG GCGGCGGCGG GTCGGCCACC
CTGATGCTCG CCGGGGTCGC CGTCTCCGCG TTCCTCGGCG CGGTGCAGAC CTTCCTCATG
CAGCTCGATT CGCGGGAGCT GCAACGCATC TACTCGTGGG TGCTCGGCGG CGTTGGATCG
GCCGACGGCC CGCTGCTGCT CGCGGTCGCG CCGTATGCGG CGGCTTCCGT GCTCGTGCTC
GTGCTCCACG GCCGGCTGCT GGACGTACTG GCCGTGGGGG ACGACGAGGC CACCTCGCTG
GGGATCTCGT CGCGCCGCGT GCGGCTGGTG GTGCTGGTCG CCGCATCGCT GGCGACCGCG
TGTGCGGTGG CGATCGGTGG GCTGATCGGG TTCGTGGGCA TCGTGGTTCC GCACGTGGTC
CGGCGGGTCG CGCGATCGTC GTCCTATCGG GTGGTGCTGC CGCTGTCTCT GGTGGGCGGA
GCGGCGTTCC TGGAGGTTGC CGATGTGATC GCACGTACGG TCGTGGCACC GGGGGAGCTC
CCGCTGGGCG TCGTCACCGC CTTCGTCGGC GGTCCCTTCT TCGTTGTGGT GTTGCGGGCG
ATGCGGGCAC GGGGCGAAGC ATGA
|
|---|
| Protein sequence | MTAPSRVSGL RPATLIIAVM VLVASTVLGL LVGAADLPLR GVLWELADRL PFVHVDSGLS
RLDRNILIEV RLPRVLAAAL VGGLLAIAGA GYQGVFRNPL ADPYLLGAAA GAGVGATATI
ALLPGNPAAT VPVAAFVGAL TGVVLAYLLG STAGGGGSAT LMLAGVAVSA FLGAVQTFLM
QLDSRELQRI YSWVLGGVGS ADGPLLLAVA PYAAASVLVL VLHGRLLDVL AVGDDEATSL
GISSRRVRLV VLVAASLATA CAVAIGGLIG FVGIVVPHVV RRVARSSSYR VVLPLSLVGG
AAFLEVADVI ARTVVAPGEL PLGVVTAFVG GPFFVVVLRA MRARGEA
|
|---|
| |