Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1429 |
Symbol | |
ID | 9155578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 1497692 |
End bp | 1498591 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | Integrase catalytic region |
Protein accession | YP_003646396 |
Protein GI | 296139153 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACCCGC TCGTGAAAGA GCTCGCCGAC GACGGTGTTC CCGTCACGGT GTCGTGCCGG GTTTTGAAGC TCTCCCGTCA GCCTTACTAC CGTTGGCTCG CCGCCCCGGT CCCCGCGACG GAGCTGGTCG AGGCGTATCG CGCGAACGCC CTGTTCGACG CCAGCGTTGA TGATCCGGAG TTCGGTCACC GGTTACTCGC AGACGAGGCC CGCGCTGCCG GTGAGCCTAT GGCGGACCGC ACTGCGTGGC GGATCTGCCG CGACAACCGG TGGTGGAGCG TCTTCGGAAA GAAACGCTCG AGCAAGGGCG GCAAACCCGG GCCCGCGGTC CACGACGATC TATGCACCGT CACCGACGAG CACGGCAGGA CTCGTCACCG GTTCACCGCA GATGCACCGA ATCGGTTGTG GCTCACAGAT ATCACTGAAC ACAGGGCTCG GGAAGGGAAG CTGTATCTGT GTGCGATCAA AGATGCCTAC TCCGGGCGGA TCGTCGGCTA CTCCGTCGAC TCGAGGATGA AGGCCCGGCT CGCCGTCAAC GCCCTCAACA ACGCTGTCGC GATGCGCGGT GATGTCACCG GATGCATAGT TCATAGTGAC AGAGGATCGC AATTCCGGAG CCGAAAATTC CGACGTGCCT TGGAATATCA CGGACTACGC GGATCAATGG GCCGAGTCGC CTCCTGCGGC GACAATGCCG CGATGGAGTC GTTCTTCAGC CTGCTGCAGA ACAACGTCCT CGACCGCCAC TGCTGGGCCA CCCGGCAGGA ACTGCGGACC GCGATCATCA CCTGGATCGA ACGGACCTAC CACCGCCGGC GCCGACAACG CCGCCTTGGA CGATTGACAC CCATCGCATT CGAGTCCACC ATGAACCCGG CCGCGCCACA CGCGGCCTGA
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Protein sequence | MYPLVKELAD DGVPVTVSCR VLKLSRQPYY RWLAAPVPAT ELVEAYRANA LFDASVDDPE FGHRLLADEA RAAGEPMADR TAWRICRDNR WWSVFGKKRS SKGGKPGPAV HDDLCTVTDE HGRTRHRFTA DAPNRLWLTD ITEHRAREGK LYLCAIKDAY SGRIVGYSVD SRMKARLAVN ALNNAVAMRG DVTGCIVHSD RGSQFRSRKF RRALEYHGLR GSMGRVASCG DNAAMESFFS LLQNNVLDRH CWATRQELRT AIITWIERTY HRRRRQRRLG RLTPIAFEST MNPAAPHAA
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