Gene Tpau_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1393 
Symbol 
ID9155541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1463955 
End bp1464545 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content68% 
IMG OID 
ProductHNH endonuclease 
Protein accessionYP_003646360 
Protein GI296139117 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0230866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGGT CGCACGGCGC GGGTACCTCC GCGACGAGAG CGCTTGCCGA CGACTCCCGG 
ACCGACCGTA GCGCGTGGGG CAAGCGCCGG GTACTCCTGC TCAACGCCAC GTACGAACCG
CTCACCGCGG TATCGATGCG CAGGGCAATA GTCCTGATGC TCAGGGATAG GGCCGATGTG
GTCCACGACG ATCCGAACGG TCCGCTGGTG CATTCAGCGG ACCGTTCCTT GTCTGTGCCC
TCGGTGATCC GGCTGCGCAC GTACGTCCGC GTCCCGTACC GCGCGCAGGT GCCGATGACC
CGGGCAGCAT TGATGCACCG CGACCGGTTC CGCTGTGGCT ACTGCGGCGG CAAGGCCGAC
ACCATCGATC ACGTGCAACC GCGATCCCGC GGCGGAGGCC ACAGTTGGGA GAACTGCGTC
GCGTGCTGCG CATCGTGCAA TCACCGCAAA GCGGACCGGC TGCTGTCCGA ACTGGGGTGG
ACGCTGCGCA CCGAGCCGCG GCCCCCGCAG GGGCGGCACT GGCGGCTGCT CTCGACCCTC
AAGGAGGTCG ACCCGATGTG GAGTCGGTAT CTCGACCTCG ATGCGGCATA G
 
Protein sequence
MKRSHGAGTS ATRALADDSR TDRSAWGKRR VLLLNATYEP LTAVSMRRAI VLMLRDRADV 
VHDDPNGPLV HSADRSLSVP SVIRLRTYVR VPYRAQVPMT RAALMHRDRF RCGYCGGKAD
TIDHVQPRSR GGGHSWENCV ACCASCNHRK ADRLLSELGW TLRTEPRPPQ GRHWRLLSTL
KEVDPMWSRY LDLDAA