| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1392 |
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| Symbol | |
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| ID | 9155540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1462360 |
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| End bp | 1463811 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_003646359 |
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| Protein GI | 296139116 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.103234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGCAT CGGAAGCCGA TCCCGGGCGC GAGCGGCCCA CCGCTCGTGC GGGCGGCCCG
GCTGCACCGG TCGATCTCGA TGAGGCACTG GCCGAGATCG CTCGGCTACG GAGACTCGTC
GATTCGCTCA GCGCGTTGGT CGATGCGAGC GCGGACAGCG CCGAGCTCCG GCGCCTCCGG
CACGTGCAGG CCATCGCCGA CGCGGCACCC GACTCCCTCT ACGTCAAGGA CTCCGAGGGC
CGATACCTGT TCCTCAACGC CGCCGCCATG GAGGTCATCG AGGCCGGTGA CCGTCCGGTG
TCGGAGATCC TCGGTCGCGA TGACAGCGAG TTCCTCACAC CGGAGCTGTT CGAGCAGGTG
GCCGCCAACG ATCGCCGGGT GATCACCGGC GGTGAGCCGC TCGAGATCCG TGAGGAGGGG
GAGATCGGGG GGCAGTGGCG CGTCTACCGT TCCCTCAAGG CGCCCTACCG TGATCCCGCC
GGCCGGATCA CCGGGCTGAT CGGCGTCTCC CGCGATGTCA CCGAATCCCA CCGGTCGGCG
CAGGCCCTGG CGCGGGCCGA GGCCCGGTGG CAGGTGGCGG TCGACAGTTC CGGCGACGGC
ATCTGGGATT GGGATCTGGC GAGCGGATCG GTGTTCTACT CGGCCCGGTG GAAGTCCATG
CTCGGCTATG CCGAGGACGA GGTCGGTGAC ACCGCCCTGG AGTGGGAGAG CCGTGTGCAT
CCCGACGATC TGCAAGCGGC CCTGATGTCG ATGAGCAGGC ATATGCGTGG ACAGAGCGCG
GAGTACTCCT GCGAGCATCG CCTGCGCACT CGTTCGGGCG AGTGGCTCTG GGTCCGCGGC
CGCGGGCGGG TGATCGAGCG CGATCCGACC GGCCGGATCC TGCGCATGGT GGGCATCTCC
ACCGATATCA GCGGTGAGAT CGCCGAACGC CGTCGGCTCG AGCGCGAGGC GCTGGCGCTC
GAACGCCTCG CCGAGATCGA TGATCTGACC GGCATCGCCA ACCGCAGGGG CTTCACCCGT
GCCCTCAGCG CGGCCTGGCA TGCGGCATCG GCATCCGGAG GGCGCGTGCA CCTCGCGCTC
ATCGACATCG ACGATTTCAA GACGTACAAC GACGCGCACG GACACTCCGC GGGAGACCGG
GCACTGCGCC AGTTGGCCTC GGTGGTCGCG CGCGTTCCGG TGGGCGGCTC CGATGCCGCC
GCCCGGTACG GCGGCGACGA ACTCGCGCTG ATCATGACCG GTGACATCGA CTTCGCGGCC
GTCCTCGAAG AGATGCGGCG CGAGGTGCTT GCGCTCGGCC TCGTCCACGA CGGTGCGCGC
CGCGTGTCGG TGAGCTGTGG CGGCGCGTCC GGAAAGGCCG AGGAGACCAC TCCGGGACTG
TTGCTGCGCG AAGCGGACCA GCGCCTCTAC CGGGCGAAGG CAGGCGGGCG AGACCGGGTG
GTCGCAGGGT AG
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| Protein sequence | MNASEADPGR ERPTARAGGP AAPVDLDEAL AEIARLRRLV DSLSALVDAS ADSAELRRLR
HVQAIADAAP DSLYVKDSEG RYLFLNAAAM EVIEAGDRPV SEILGRDDSE FLTPELFEQV
AANDRRVITG GEPLEIREEG EIGGQWRVYR SLKAPYRDPA GRITGLIGVS RDVTESHRSA
QALARAEARW QVAVDSSGDG IWDWDLASGS VFYSARWKSM LGYAEDEVGD TALEWESRVH
PDDLQAALMS MSRHMRGQSA EYSCEHRLRT RSGEWLWVRG RGRVIERDPT GRILRMVGIS
TDISGEIAER RRLEREALAL ERLAEIDDLT GIANRRGFTR ALSAAWHAAS ASGGRVHLAL
IDIDDFKTYN DAHGHSAGDR ALRQLASVVA RVPVGGSDAA ARYGGDELAL IMTGDIDFAA
VLEEMRREVL ALGLVHDGAR RVSVSCGGAS GKAEETTPGL LLREADQRLY RAKAGGRDRV
VAG
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