| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1379 |
|---|
| Symbol | |
|---|
| ID | 9155527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 1443429 |
|---|
| End bp | 1443839 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | nitrite reductase (NAD(P)H), small subunit |
|---|
| Protein accession | YP_003646346 |
|---|
| Protein GI | 296139103 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.861198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG TCCCCTTCGA TCTGCACCGC TGGACACGGG ATTGGACGGC AGCCTGTCCG
GTGGGCAGGC TAGAACCGCT ACGCGGAGTG GCGGTGCTGC TGCCCGACGG CGCCCAGGTG
GCTCTGTTCC GGTTGGCGGA CGACAGTATC CGAGCGATCG GCAACATCGA CCCGATCGGT
CGGGCCGCGG TGATGTCGCG GGGCATCGTC GGCGATCGCG GGGGATTCCC GGTGGTGCAG
TCACCGCTCA AGAAGCAGGC CTTCAGCCTG CTCGACGGAC GCTGTCTCGA TGCCCCCGAC
TTCTCGATCC CCGTGTACGA CACCCGGATA TCCTTGGACG GCACCGTGTT CGTGGCGAAT
TCACCCGAGA TCAGATTCGG GTATCGGCCG CCTCGACCGG AATCCGCATA A
|
|---|
| Protein sequence | MTTVPFDLHR WTRDWTAACP VGRLEPLRGV AVLLPDGAQV ALFRLADDSI RAIGNIDPIG
RAAVMSRGIV GDRGGFPVVQ SPLKKQAFSL LDGRCLDAPD FSIPVYDTRI SLDGTVFVAN
SPEIRFGYRP PRPESA
|
|---|
| |