| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1376 |
|---|
| Symbol | |
|---|
| ID | 9155524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1440042 |
|---|
| End bp | 1441454 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003646343 |
|---|
| Protein GI | 296139100 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0667515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCT CACACACGAT CACCGACTGG GATCCCGAGA ACACCGAGCA GTGGGAGAAC
GGCGGCGAGA AGATCGCCAA GCGGAATCTG TTCTGGTCCG TCGCCGCCGA GCACGTCGGA
TTCTCGGTGT GGTCGCTGTG GTCGGTGATG GTGTTGTTCA TGCCGCAGGA CGTGTACGGC
CTCAGTACTG CCGACAAGTT CCTCATCGGC GCCACCGCGA CCCTCGTCGG CTCGCTGCTG
CGGCTGCCGT ACACGCTCGC CACGGCACGG TTCGGCGGAC GCAATTGGAC CGTGTTCAGC
GCCTTCGTGC TGGCGATCCC GGTGATCGCG ACCATCGTGA TCCTCGCTCA TCCAGGTCAG
CCGCTGTGGG TGTACCTGCT GTGCGCGGCG CTCACCGGTT TCGGCGGCGG CAACTTCGCC
TCGTCGATGA CCAACATCAA TGCCTTCTTC CCGCAGCGTC TCAAGGGCTG GGCGCTGGGC
CTGAACGCCG GCGGCGGCAA CATCGGCGTA CCCGCCGTGC AGCTGGTTGG CCTGCTGGTG
ATCGCGACCG CCGGTGCCGG CGAACCCTAT TGGGTGTGCG CCGTGTACCT CGTCCTGCTC
GCCGTCGCGG GCATCGGTGC CGCCCTCTTC ATGGATAACC TGCAGGTTCC CACCGTCGAT
ACCGCGGCGA TGCGCAAGGC CGCCACAGAC CGCGACACCT GGATCGTCTC GCTCCTCTAC
ATCGGTACCT TCGGCTCGTT CATCGGCTTC TCCTTCGCGT TCGGCCAGGT GCTCCAGGCG
ACCTTCAAGG CGGGCGGCGC CACCGCCGCC GAAGCATCGC TACAGGCAGC GCAGATCGCC
TTCCTCGGCC CGCTGCTCGG TTCCATCGCG CGGGTCTACG GAGGCAAGCT CGCCGATCGC
ATCGGCGGCG GACGCGTGAC CCTGTACGTG TTCGCCGGCA TGATCGCCGG CGCCGGAATC
CTCATCGCCG CCGCCACCAG CGCGGGTACG GGAGCACCGA CCGGAGCGAC CATGGCGGCG
TATGTCGCCG GATTCATCGC CCTGTTCCTG CTCAGCGGAC TGGGCAACGG TTCGGTGTAC
AAGATGATCC CCTCGATCTT CGAGGCCAAG TCGCGGTCAC TCGATGCCGA CGAGGCGACC
CGCACCCACT ACTCGCGCGC CATGTCGGGC GCCGTGATCG GTATCGCAGG TGCGGTCGGC
GGTCTCGGAG GCGTCGGAAT CAACCTGGTG TTGCGTGCGT CCTACCAGGC GAGCGGCACC
GCGACGACCG CCTTCTGGGT GTTCGGCGCC TTCTACGTCG TGGCCGCTCT GGTCACCTGG
AAGGTGTACG TGCGTACCCC CGCGCCGAGT GCGCATGGCA CGCTCGACGG GACGCACCGC
CGCGAACCGC TCAGCACAGC CGCTGACACG TGA
|
|---|
| Protein sequence | MARSHTITDW DPENTEQWEN GGEKIAKRNL FWSVAAEHVG FSVWSLWSVM VLFMPQDVYG
LSTADKFLIG ATATLVGSLL RLPYTLATAR FGGRNWTVFS AFVLAIPVIA TIVILAHPGQ
PLWVYLLCAA LTGFGGGNFA SSMTNINAFF PQRLKGWALG LNAGGGNIGV PAVQLVGLLV
IATAGAGEPY WVCAVYLVLL AVAGIGAALF MDNLQVPTVD TAAMRKAATD RDTWIVSLLY
IGTFGSFIGF SFAFGQVLQA TFKAGGATAA EASLQAAQIA FLGPLLGSIA RVYGGKLADR
IGGGRVTLYV FAGMIAGAGI LIAAATSAGT GAPTGATMAA YVAGFIALFL LSGLGNGSVY
KMIPSIFEAK SRSLDADEAT RTHYSRAMSG AVIGIAGAVG GLGGVGINLV LRASYQASGT
ATTAFWVFGA FYVVAALVTW KVYVRTPAPS AHGTLDGTHR REPLSTAADT
|
|---|
| |