Gene Tpau_1369 details

Gene Information

• Locus tag: Tpau_1369
• ID: 9155517
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1429076
• End bp: 1431010
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 69%
• Product: thiamine pyrophosphate protein central region
• Protein accession: YP_003646336
• Protein GI: 296139093

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACAC GCAGGATGAC GGTCGGCCAG GCGCTCGTCG AGTTCCTCGC GCACCAATGG 
ACCGTCGACG AAGTTCGCGG ACCGGATGCA ACGGTGAGCA CCATCCGCGA GCGGACGATC 
CCCGGCACCT TCGGAATCTT CGGTCACGGC AACGTCGCCG GCGTCGGCCA GGCACTGCTG 
CAGACCTCGA TCGACGACCC CGGCATGATG CCGTATCACC AGGCCCGCAA CGAACAGGCC 
ATGGTGCACC AAGCCGTCGG CTACGCGCGG ATGCACCGTC GCCGCGGCAC GTACGCCTGC 
ACCGCCTCCG TCGGCCCCGG CGCCGCGAAC ATGCTCACCG GTGCGGCGCT CGCCACCGCG 
AACCGGATGC CCGCACTGTT GCTCGTCTCC GACACGTTCG CCACCCGGGT CGCCGACCCC 
GTCTTGCAGC AGATCGAGCA TCCGCACGAC ATCGGGATCC AGGTCTCGGA CGCGTTTCGG 
CCGCTGTCGC GGTTCTTCGA CCGGGTGCAG CGGCCGGAAC AGTTGTTCTC GATCGCGCTC 
GCCGCGCTCC GTGTGCTCAC CGACCCGGCC GAGACGGGGG CCGTGACCAT CGCGCTGCCC 
GAGGACGTCC AGGCCGAGGC CATCGACGTA CCTGAGGAGT TCCTCGCCGA CCGGGACTGG 
CACCTGCGCC GTCCCCTGCC CGAACGCGGT CCGCTGGCCC GTGCCGTGGA GGCGATCCGC 
GGGGCGGCCC GGCCGCTGAT CGTGTCCGGC GGCGGCGTGA TTCATTCCGG AGCCGAGGAC 
GCGCTGCGTG CCTTCGTCGA GGCGACGGGA ATCCCGGTGG GCACCACCCA GGCCGGCGGC 
GGATCACTGG TGTGGGACCA CCCGCAGAAT CTCGGCGGCA TCGGCGCCAC CGGCACCTTC 
GCCGCCAACG CGACCGCAGC GCACGCCGAT GTCGTGATCG GAATCGGCAC CCGCTACAGC 
GATTTCACCA CCGCCAGTCG CACTGCCTTC CAGGACGCCG GTGTCACCTT CGTCAACGTC 
AACGTCGCCG CTTTCGACGC CTACAAACAC GGCTCGCAGT TCCCGGTGAT CGCCGACGCT 
CGTGCCACGC TCGATGCTCT CCGCGTCGAA CTGAGCGGGT ACCGAGTGGA TTCCGGTTAC 
GCCGACGATG TCGCTGCCCG CAAACAGGAG TGGGACCGGA CCGTCGATCT CGCGCTGGCC 
CCGACCGGTG GTGCGCTGCT CGGCCAGCCC GAGATCATCG GCGCGGTGCA CGCGGCGATG 
GACCCGCGCG ATGTGATCGT GCAGGCGGCG GGATCGCTCC CCGGTGATCT GCAGAAGCTG 
TGGCGAGTGC GTGATCCGCT CGGCTACCAC GTCGAATACG CCTTCTCCTG CATGGGCTAC 
GAGATCGCCG GCGGTCTCGG TGCCAAACGT GGGTTGCTCG CGGACGGAGA CGACCGCGAC 
GTGGTCGTGA TGGTGGGCGA CGGTTCGTAC CTGATGCTGC ATACAGAACT GGTGACCGCG 
GTGGCCGAGG GCATCAAGCT GATCGTGATC ATCGTGCAGA ACCAGGGGTA CGCCTCGATC 
GGCCACCTGT CCGAGACCAT CGGCTCCCAG CGGTACGGCA CGCGCTACCG GTACGCGCGA 
ACCGGCGATC CCGCGGCCGG CTCCGGATAC CTCCCGGTCG ATCTGGCCGC GAATGCCGCT 
AGTTACGGCG TCGACGTCAT CGATATCGCA CCGGGACCGG ATGCGTTCGG GGAGTTGTCG 
CGGGCCGTGG GCACCGCCAA GGCCGCGAGT GGCCCCACGG TGATCCATCT GCACAGCGAC 
CCGCTGGTGT ACGCCCCCGA CGGCGACGGC TGGTGGGATG TACCGGTCGC GGAGGTGTCG 
ACCGTGGACA GCACTCGCGC CGCGCGCGCG GAGTACGAAC GGCAGCGCCC GCGGCAGCGC 
CCACTCCTGG GCTGA 

 

Protein sequence

MTTRRMTVGQ ALVEFLAHQW TVDEVRGPDA TVSTIRERTI PGTFGIFGHG NVAGVGQALL 
QTSIDDPGMM PYHQARNEQA MVHQAVGYAR MHRRRGTYAC TASVGPGAAN MLTGAALATA 
NRMPALLLVS DTFATRVADP VLQQIEHPHD IGIQVSDAFR PLSRFFDRVQ RPEQLFSIAL 
AALRVLTDPA ETGAVTIALP EDVQAEAIDV PEEFLADRDW HLRRPLPERG PLARAVEAIR 
GAARPLIVSG GGVIHSGAED ALRAFVEATG IPVGTTQAGG GSLVWDHPQN LGGIGATGTF 
AANATAAHAD VVIGIGTRYS DFTTASRTAF QDAGVTFVNV NVAAFDAYKH GSQFPVIADA 
RATLDALRVE LSGYRVDSGY ADDVAARKQE WDRTVDLALA PTGGALLGQP EIIGAVHAAM 
DPRDVIVQAA GSLPGDLQKL WRVRDPLGYH VEYAFSCMGY EIAGGLGAKR GLLADGDDRD 
VVVMVGDGSY LMLHTELVTA VAEGIKLIVI IVQNQGYASI GHLSETIGSQ RYGTRYRYAR 
TGDPAAGSGY LPVDLAANAA SYGVDVIDIA PGPDAFGELS RAVGTAKAAS GPTVIHLHSD 
PLVYAPDGDG WWDVPVAEVS TVDSTRAARA EYERQRPRQR PLLG