Gene Tpau_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1345 
Symbol 
ID9155492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1400275 
End bp1400847 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003646313 
Protein GI296139070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGGCG TGGCCCTCGA ACATGCGCTG CTCGTGTCCC TGAGCGAGCG ATCCGGCACC 
GGGTATCAGC TCACCCGCCG CTTCGACCGG TCCATCGGCC ACTGGTGGCG GGCCTCCCAC
CAGCAGATCT ACAAGACTCT GGGGCGGATG ACGGACAGCG GACTGGTCAC CTTCGTCGAA
CAGGCGCAGG ACGGTAAGCC CGATAAGAAG GTCTACTCGA TCACGGACTG CGGCCGCGCC
GCGCTCTCGG AGTGGATCCG CACCCCCGGC AAGGACGTCA CCGACCGCCG GGAACTCGCC
ACCAAGATCC GCGGGGCCGC ACCGTCGGAC CTGCCCGACC TGACCGCCGA GATCCGGCGG
ATCCGCAACC TGCACGCAGA GCGTGCGGCT CTGTTCCGCG CGTTCGAAGC CGACGACTAT
CCGTCTCCCG CAGACCTCAC CGGCACGGCG CTGCAGCAGT ACCTCGTGCT GCGCGGCGGC
GTGCTCTCCG AGCAGGGCAC CGTCGACTGG CTCGACGAGG TCCTGGCCGC CCTCACTCCC
GTAACACCGC AGCTTCAGCC CATCGCAGAC TAA
 
Protein sequence
MAGVALEHAL LVSLSERSGT GYQLTRRFDR SIGHWWRASH QQIYKTLGRM TDSGLVTFVE 
QAQDGKPDKK VYSITDCGRA ALSEWIRTPG KDVTDRRELA TKIRGAAPSD LPDLTAEIRR
IRNLHAERAA LFRAFEADDY PSPADLTGTA LQQYLVLRGG VLSEQGTVDW LDEVLAALTP
VTPQLQPIAD