Gene Tpau_1317 details

Gene Information

• Locus tag: Tpau_1317
• ID: 9155462
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1370761
• End bp: 1376196
• Gene Length: 5436 bp
• Protein Length: 1811 aa
• Translation table: 11
• GC content: 69%
• Product: Carbamoyl-phosphate synthase L chain ATP- binding protein
• Protein accession: YP_003646285
• Protein GI: 296139042

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.468055
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTCAGCC GAATCGCCAT CGTGAACCGC GGCGAGGCCG CGATGCGCCT CATCCATGCC 
GTACGCGACC TGGCCGCGGA GACCGGTCAG CAGATCGAGA CCGTCGCCCT CTACACCGAC 
GTCGACCGCA CCGCGACCTT CGTCCGCGAG GCCGACATCG CCTACGACTT GGGTCCTGCC 
GCGGCGCGTC CCTACCTGAA CTACGAGCTG CTCGGGAAGG CCCTGCAGGA GACCGGCGCC 
GATGCGGCGT GGGTCGGCTG GGGCTTCGTC GCCGAGGATC CTGCGTTCGC CGAGAAGTGC 
GCCGAGGTCG GCGTGACCTT CGTCGGGCCC AGCCCTGAGG CCATGCGCCA GCTGGGCGAC 
AAGATCGGCG CCAAGCTGAT CGCCGAAGAG GTCGGCGTTC CCGTCGCGCC GTGGAGCCGC 
GGCCCGGTGG AGACGCTGGA GGAGGCCAAG GAGAAGGCGA AGGACATCGG TTACCCGCTG 
ATGCTCAAGG CGACCGCCGG CGGTGGTGGT CGCGGCATCC GCATGGTCGC CTCCGACGCC 
GACCTCGAGG AGGCTTACCT CCGTACTCGT GAGGAGGCCG AGCGCGCCTT CGGCAGCGGC 
GTCGTCTTCC TCGAGCGCCT GGTCACCGGT GCCCGCCACG TCGAGGTCCA GGTGATCTCC 
GACGGCGAGA CCGCGTGGGC GCTCGGTGTG CGCGACTGCT CGGTGCAGCG CCGCAACCAG 
AAGGTCATCG AGGAGTCGGC CTCGCCGGTG CTCGGCCCGG AGCAGGTGCA GCGGCTCAAG 
GAATCCGCGG AGCGCCTGGC CATCAAGGTG GGGTACCGCG GCGCCGCCAC CGTCGAATTC 
CTGTACCACC CGGGCGACGA TCTGCTCGCC TTCCTCGAAG TGAACACCCG CCTGCAGGTC 
GAGCACCCGA TCACCGAGGT CACCAACGAC TTCGACCTGG TGCGCGCGCA GCTGCACGTC 
GCGTCGGGCG GCAAGCTCGA CGGTGTGCGT CCCGTCGAGC GCGGGCACGC CATCGAGGCG 
CGCCTGAACG CCGAGGACCC CGATCGCGAT TTCGCGCCCG CGCCGGGCCG CATCGCGCTG 
CTGGACCTGC CCGCCGGCCC TGGCATCCGC ATCGACACCG GCGTCTCGCA GGGCGACACC 
ATCCCCGCCG ACTTCGACTC GATGATCGCC AAGGTCATCG CCTACGGCAG CGACCGGGAG 
CAGGCTCTCG GCCGCCTGCG CCGCGCCATG AACGAGACCC GCGTCATCAT CGAGGGCGGC 
GCCACCAACA AGAGTTTCGT GCTCGACCTG CTCAATCAGC CCGAGGTGAT CGACGGTAGC 
GCCGACACCG GCTGGATCGA CCGGGTCCGC GGCGAGGGGC GCCTGGTCGC CGACCGGCAC 
ACCGCCGTCG CGTTGGCCTC GGCAGCGATC GACGCCTACG AAGACGAGGA GCGGGCGGAA 
CTGCAGCGCC TGTTCGCGAC CGCCTCCGGC GGCCGCCCGC AGGTGCAGCA CGAGAGCGGT 
CAGCCGCTCG ACTTCAAGCT GCGTGGCGCG AGCTACCGCG TCCGTGTCGC GCGCACCGGT 
GCGCATCGGT TCCGTCTCGT CATCGAGAAC GGTCCCGAGG TGCGCACCGC CGACGTCGAT 
CTGGAGCGGT TCGACAATCA CACGGGCCAG GCCGTGGTCA ACGGTGTCCG GTACCGGCTC 
ACCACCGGCA CCCACGGCCC CGTGCACGTG GTCGACGTGG ACGGTGTCAC GCACCGTGTG 
AGCCGCGATG AGGGTGGCGT TGTCCGTTCT CCCGCACCGG CTCTCGTGGT GGCCGTGCCG 
CTATCGGTGG GCGACGAGGT GGCCTCCGGC GACCCGATCC TGGTGCTCGA GTCGATGAAG 
ATGGAGACGG TGATCCGCGC CCCGTTCGCG GCCCGACTCA AGGAGATCAC GGTCACCGTC 
GGTAGCCAGG TGGAGGCCGG CGCGGCGATG CTGCGCCTGG AACCCCTCGG CGACGACACC 
GAGTCCGCCG GCGCCGAGGA GGCCACCCCG CTCGATCTGG TGACCGAGCC GGCCGCTGCC 
GACGCCGAGG CCCGTGCCGC CCGCGGCCGG GACGATCTGC GCAGTCTGCT CCTCGGTTTC 
GACCGTGATC CGGCCGACGA TCGCCGGGTG CTCGACGACT ACCTCGCCGC GCGCTCCGAG 
GTCGGCGCCG GCCCCGTCGC CGACGAGCTG GCCCTGGCCG GTGTCTTCGC CGATCTCGCG 
GAGCTGAGCC TGCGGAGCGC GGTGAGCGAC GATCAGGTGC ACAGCCCCCG TGAGCATTTC 
CACACCTACC TGCGCAGCCT CGACGTCGAG CGCGCCGGCA TCCCGGACAT CTTCCAGGCG 
AAGCTGTCGG CGGCCCTGGC GCACTACGGC ATCACCGAAC TCGAGCGCAC CGCCGATCTG 
GAGGGTGCGG TGTTCCGCAT CTTCTTGGCC CTGCAGCGCC CGAAGGATAC GGTTGCCGCG 
ATCACCACGC TGCTGCGGAA CTGGCTGCGC GAGCCGGCGC CGGACACGTC GGTCGACGCA 
CGTCCCACGC TGGAGCGCCT GATCGGTGCC ACCCAGTCCC GGTATCCGGC GATCGCCGAC 
CTCGCCCGCG GCGTGGTCTT CGCGTGGTTC GGTCAGCCGC TGCTGCAGGG CAACCGCAGC 
ACGGTGTACT CGCGAGTCCG CGAGAACCTC ACCTACCTCG ACGGTAAGCC CGATGCGGCC 
GATCGCGCCG ACCGGATCGG CGAAATGGTG CGCAGCACCG AGCCGCTGGT CGCTCTCCTG 
GCGGAGCGTC TGGTCTCGGA CGCCCGCGCC GATAACACCG TCATGCTCGA GGTGCTCACC 
CGCCGCTACT ACGGCAACAA GGGGCTCAGC GCAGTCCGAA CCCAGGACGT CGACGGCACC 
ACCTTCGTGG TCGCCGAGAA GGACGGTGGG CTGCTCGCCT CGACGGCTGT CGCCTTCGAG 
GGACTGCCCG GCGCTATCAC GGGTCTCGCC AAGGTGGCCG ACGGTGCCGC ATCGGTGGAT 
GCCGACATCT ACCTCAGCTG GGAGCAACAG CCGGAGGACT TCGACGAGAT GGCGGTGACG 
CTCGACAACC TGCTCAGCGC GCACCCGCTG CCGCCGCAGG TGCGCCGAGT CACCGTCACC 
GTCGCGGGGA GCGATGGCTC GGTCATGCAC CACCACTTCA CTTTCCGATC CGCGGCGAAC 
GGGGTGGCGG AGGATCGCCT GATCCGCGGC CTGCACCCGT ACATTGCGCA GCGGATGCAG 
CTCGAACGGC TCCGCCGGTT CGACCTCACC CGCCTGCCGT CCTCGGACGA CGAGGAGGTG 
TACCTGTACC GCGCCGTCGC CAAGGAGAAT CCGGCCGACG ACCGGCTGGT GGCGTTCGCC 
CAGGTCCGTG ACCTGGCGGC GGTGCGCGAC GGTAACGGGA ATCTGCTCGC CCTGCCTGCG 
GCCGAGATCG CGCTGGCCAC CTGTGTGGAT TCCATCCGGC GCGCGCAGGC CGCACGCCCG 
TCGGCGAAGC GTCTGCCCAC CAACCGGATC GTGATGTACA TCTGGCCGCC CATCGACCTC 
AGCGAGGCTG ATATCGCGGA GGTCGTTCGG CACGTCGAGT CGATCGCCGC CGGCGCGGGC 
CTCGAAGAGG TCCTGTTCAT CGGTCGCCGT CGGGACGATG ACGGTACGCT GCAGAAGACT 
GAGGTGCGGA TCGCATTGAG CCCCACCGGA AACGCGGTCT TCTTCGAGGG TGGGCCGAGT 
GATGAGCCGG TCAGCCCGAT CGACGGTTAC CGGCAGAAGG TACTGCGCGC AGCGAGCCGC 
AACACCGCCT ATCCGTACGA GTTGACCGGC CTGCTGGGCG AGTTCACCGA GTACGACCTG 
CAAGAAGGCG ATATCGGCGA TGTGCTGGTC CCGGTCGATC GGCCGAAGGG TCGTAACACC 
GCGGGCATCG TTGCGGGTGT GATCAAGACT GCGACCCCCG AGTATCCGGA GGGCATCACC 
CGCGTCCTGC TACTCGGCGA TCCGACCAAG TCGCTGGGCG CACTGGCGGA GGGGGAGTGC 
CGCCGGATCA TCGCGGCGAT CGATCTCGCC GATCGCATGC AGGTGCCGGT CGAGTGGTAT 
GCCCTCTCCG CCGGTGCCCG CATCTCCATG GACTCGGGTA CCGAGAATAT GGACTGGGTG 
GCCGAGGCGC TCAAGAAGAT CGTCGAGTTC ACGCAGGAGG GCGGCGAGAT CAATATCGTC 
TCCGCCGGCA TCAACGTGGG AGCGCAGCCG TATTGGAACG CCGAGGCCAC CATGCTCATG 
CACACCAGGG GTGTGCTGAT CATGACCCCG GAGTCGGCCA TGGTGCTCAC CGGTAAGCAG 
TCGCTCGACT TCTCCGGCGG TGTCTCGGCG GAGGACAACT TCGGTATCGG CGGCTACGAC 
CGCATCATGG GCCCGAACGG TCAGGCGCAG TACTGGGCGC CGGATCTACT GGGCGCGCGT 
GACATTCTGA TGCGGCACTA CGCGCACACC TACATCGCGC CGGGCGAGGC CACGCCGCGC 
GCCTCGCAGA CCAACGACCC GTCGGACCGC GATATCACCG CGTTCCCGCA CCGGATCGCG 
GACAGCGACT TCACCACTGT CGGCGACATC TTCTCCGGGG AGAAGAACCC GGATCGCAAG 
AAGCCCTTCG ATATCCGCAC CGTGATGCGC GCGCTGTCCG ACCAGGATCA CCCGATCCTG 
GAGCGCTGGG CGGGCATGGC CGACGCGGAG ACCGCGGTGG TGCAGGACGT GCATATCGGC 
GGTACTCCGG TGGCGCTGCT GGGCATCGAG TCGAAGTCCG TCCCGCGTCT GGGCTTCCCG 
GCCACCGACG GTCCCGACAC GTACACCGCC GGCACCCTGT TCCCGCAGTC GTCGAAGAAG 
GCGGCGCGCG CGATCAACGC CGCCAGCGGT AACCGCCCGC TGGTGGTGCT GGCCAACCTG 
TCGGGCTTCG ACGGATCGCC CGAGTCGCTG CGCAAGCTTC AGCTGGAGTA CGGTGCCGAG 
ATCGGTCGCG CGATCGTGAA CTTCAAGGGC CCCATCGTGT TCTGTGTGAT CTCGCGCTAC 
CACGGCGGTG CCTTCGTGGT GTTCTCCAAG CGCCTGAACC CGAATATGAC GGTGCTGGCC 
GTCGAGGGCT CGTTCGCCTC GGTGCTCGGC GGTGCCCCCG CTGCGGCCGT GGTCTTCTCC 
GGAGAGGTCA ATTCCCGCAC CGGTGCCGAT TCGCGGGTCA AGGCGCTGGA GGAGCGCATC 
GCCGGTGCTT CCGGCACCGA GCGGGCCGGG CTCGCTGCCG AGCTCGAGGA GGTGCGGGCC 
TCGGTACGTG CCGAGAAGCT GGGCGAGGTG GCCGCGGAGT TCGATCAGGT GCACAGCATC 
CGGCGTGCCG TGGAGGTGGG CTCGGTCGAC GAGATCGTCG CCGCGTCCGA CCTGCGCCCG 
AAGATCATCT CGGTGATCGC GAACGCCGCG AAGTAG 

 

Protein sequence

MFSRIAIVNR GEAAMRLIHA VRDLAAETGQ QIETVALYTD VDRTATFVRE ADIAYDLGPA 
AARPYLNYEL LGKALQETGA DAAWVGWGFV AEDPAFAEKC AEVGVTFVGP SPEAMRQLGD 
KIGAKLIAEE VGVPVAPWSR GPVETLEEAK EKAKDIGYPL MLKATAGGGG RGIRMVASDA 
DLEEAYLRTR EEAERAFGSG VVFLERLVTG ARHVEVQVIS DGETAWALGV RDCSVQRRNQ 
KVIEESASPV LGPEQVQRLK ESAERLAIKV GYRGAATVEF LYHPGDDLLA FLEVNTRLQV 
EHPITEVTND FDLVRAQLHV ASGGKLDGVR PVERGHAIEA RLNAEDPDRD FAPAPGRIAL 
LDLPAGPGIR IDTGVSQGDT IPADFDSMIA KVIAYGSDRE QALGRLRRAM NETRVIIEGG 
ATNKSFVLDL LNQPEVIDGS ADTGWIDRVR GEGRLVADRH TAVALASAAI DAYEDEERAE 
LQRLFATASG GRPQVQHESG QPLDFKLRGA SYRVRVARTG AHRFRLVIEN GPEVRTADVD 
LERFDNHTGQ AVVNGVRYRL TTGTHGPVHV VDVDGVTHRV SRDEGGVVRS PAPALVVAVP 
LSVGDEVASG DPILVLESMK METVIRAPFA ARLKEITVTV GSQVEAGAAM LRLEPLGDDT 
ESAGAEEATP LDLVTEPAAA DAEARAARGR DDLRSLLLGF DRDPADDRRV LDDYLAARSE 
VGAGPVADEL ALAGVFADLA ELSLRSAVSD DQVHSPREHF HTYLRSLDVE RAGIPDIFQA 
KLSAALAHYG ITELERTADL EGAVFRIFLA LQRPKDTVAA ITTLLRNWLR EPAPDTSVDA 
RPTLERLIGA TQSRYPAIAD LARGVVFAWF GQPLLQGNRS TVYSRVRENL TYLDGKPDAA 
DRADRIGEMV RSTEPLVALL AERLVSDARA DNTVMLEVLT RRYYGNKGLS AVRTQDVDGT 
TFVVAEKDGG LLASTAVAFE GLPGAITGLA KVADGAASVD ADIYLSWEQQ PEDFDEMAVT 
LDNLLSAHPL PPQVRRVTVT VAGSDGSVMH HHFTFRSAAN GVAEDRLIRG LHPYIAQRMQ 
LERLRRFDLT RLPSSDDEEV YLYRAVAKEN PADDRLVAFA QVRDLAAVRD GNGNLLALPA 
AEIALATCVD SIRRAQAARP SAKRLPTNRI VMYIWPPIDL SEADIAEVVR HVESIAAGAG 
LEEVLFIGRR RDDDGTLQKT EVRIALSPTG NAVFFEGGPS DEPVSPIDGY RQKVLRAASR 
NTAYPYELTG LLGEFTEYDL QEGDIGDVLV PVDRPKGRNT AGIVAGVIKT ATPEYPEGIT 
RVLLLGDPTK SLGALAEGEC RRIIAAIDLA DRMQVPVEWY ALSAGARISM DSGTENMDWV 
AEALKKIVEF TQEGGEINIV SAGINVGAQP YWNAEATMLM HTRGVLIMTP ESAMVLTGKQ 
SLDFSGGVSA EDNFGIGGYD RIMGPNGQAQ YWAPDLLGAR DILMRHYAHT YIAPGEATPR 
ASQTNDPSDR DITAFPHRIA DSDFTTVGDI FSGEKNPDRK KPFDIRTVMR ALSDQDHPIL 
ERWAGMADAE TAVVQDVHIG GTPVALLGIE SKSVPRLGFP ATDGPDTYTA GTLFPQSSKK 
AARAINAASG NRPLVVLANL SGFDGSPESL RKLQLEYGAE IGRAIVNFKG PIVFCVISRY 
HGGAFVVFSK RLNPNMTVLA VEGSFASVLG GAPAAAVVFS GEVNSRTGAD SRVKALEERI 
AGASGTERAG LAAELEEVRA SVRAEKLGEV AAEFDQVHSI RRAVEVGSVD EIVAASDLRP 
KIISVIANAA K