| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1310 |
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| Symbol | |
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| ID | 9155455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 1356610 |
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| End bp | 1357434 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | Shikimate dehydrogenase substrate binding domain protein |
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| Protein accession | YP_003646278 |
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| Protein GI | 296139035 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.428593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCCA CCGTCGCAAT GCCCGACCGC GACACCGTGC TGTGTATGTC GCTGTCCGGC
CGCCCCAGCA ACATCGGCAC CCGGTTCCAC AACTATCTGT ACCGCGAACT GGGCCTGAAC
TACCTGTACA AAGCCTTCAC CACCACCGAC CTACCGGCGG CCATCGGCGG CGTGCGCGCC
CTCGGAATCC GCGGTTGCGC GATCTCGATG CCGTTCAAGG AGGCGGTGAT CGAGTTGATC
GACGTGATGG AGCCCTCGGC CGCGGCGATC GACTCGGTGA ACACCATCGT CAACGAGAAC
GGTGTGCTGC ACGCCTACAA CACCGACTAC GCAGCGATCG CCTCGCTGCT GGCATCGAAC
GCCGTTGATC CGGCGCTGCC GGTGGCGGTC GCCGGGTCGG GCGGTATGGC GAAGGCGGTG
GTCGCCGCGC TGCGCGATCA CGGCTGTACC GACGTCACCG TGGTGGCACG CAACCCCGCG
ACCGGCGGGG CGCTGGCCGA CCAGTACGGG TTCCGGCATA CGACCGACGC GCCCGACGAC
GCCCGGGTCC TGATCAACGC CACCCCGGTA GGCATGGACG GCGGGCCCGC GAGCACCGAT
CTCGCCTTCC CGCAGGCGCT GATCGACACC GCCGACACCG TCTTCGACGT GGTGGCGATG
CCGCCCGAGA CGCCGTTCGT TCGCGCCGGC CGCGCCGCCG GGAAGACGGT GATCACCGGA
GCCGAGGTGA TCGCGCTGCA GGCCGCTGAG CAATTCGTGC TCTACACCGG CGTGCGGCCC
GACCCGGAGC TGATCCGCAC CGCCTCGGAG TTCTCCCGTT CCTGA
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| Protein sequence | MSATVAMPDR DTVLCMSLSG RPSNIGTRFH NYLYRELGLN YLYKAFTTTD LPAAIGGVRA
LGIRGCAISM PFKEAVIELI DVMEPSAAAI DSVNTIVNEN GVLHAYNTDY AAIASLLASN
AVDPALPVAV AGSGGMAKAV VAALRDHGCT DVTVVARNPA TGGALADQYG FRHTTDAPDD
ARVLINATPV GMDGGPASTD LAFPQALIDT ADTVFDVVAM PPETPFVRAG RAAGKTVITG
AEVIALQAAE QFVLYTGVRP DPELIRTASE FSRS
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