Gene Tpau_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1292 
Symbol 
ID9155436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1331412 
End bp1332068 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content72% 
IMG OID 
ProductRhomboid family protein 
Protein accessionYP_003646261 
Protein GI296139018 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCTGT CGACCAACGA CGGGACGCCC GCGCGCTCCG GACCGGGGTG GCTCGCCGGA 
CGCCGCGTGG GCCGCGCCGC GGCCGCGATC GTCGCCTTCG TGGCGCTGCT GTGGGTGCTC 
GAGGGCGTCG ACACCCTGTT GAACAACGCG CTCGATCAGT GGGGCATCCG CCCGCGCCAG 
GAGGAGGGCC TGCGCGGCAT CGCCTTCGCG CCCCTGCTGC ACGGTGGCTG GGAGCACCTC 
GCGGCCAACT CCGTTCCCGC ACTGGTGCTC GGCTTCGTCG GTCTGGTGGC AGGCGCCGCC 
CGGTTCGTCG CAGCCACCGC GCTGATCTGG CTGGTCTCGG GAGTCGGTGT ATGGCTCACC 
GGTGGTACCA ACACGCTCGT GGTCGGCCTG TCCGGGGTGA TCTTCGGCTG GATGACCTAC 
CTCGTGGCAC GTGGCCTCTT CTCTCGCAAG GTCATCGACG TCGTGGTCGG ACTCGCGCTG 
CTGGTGGTGT ACGGCGGCAT GCTGTGGGGC GTCTTCCCCG GCGATCCGGG GATCTCGTGG 
CAGGCGCACC TGTGGGGAGC GGTCGGCGGC GTCCTCGCGG CCGTCTGGCT GGGTCGCCGG 
TCCCGTGGGG CGGTGCGGTC CGGCAAATCC CGTGAGGTCG GCTCGATTGC CTCGTGA
 
Protein sequence
MTLSTNDGTP ARSGPGWLAG RRVGRAAAAI VAFVALLWVL EGVDTLLNNA LDQWGIRPRQ 
EEGLRGIAFA PLLHGGWEHL AANSVPALVL GFVGLVAGAA RFVAATALIW LVSGVGVWLT 
GGTNTLVVGL SGVIFGWMTY LVARGLFSRK VIDVVVGLAL LVVYGGMLWG VFPGDPGISW 
QAHLWGAVGG VLAAVWLGRR SRGAVRSGKS REVGSIAS