Gene Tpau_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1286 
Symbol 
ID9155430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1327337 
End bp1328704 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content72% 
IMG OID 
Productnicotinate phosphoribosyltransferase 
Protein accessionYP_003646255 
Protein GI296139012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGTGG ATGACACAGC CCGTTCGAAG AACACCCTGT CCGATTCGAG CGGGCGCGCT 
CCGGGTAGCT CGGCGTTGCT GACCGACCAG TACGAGCTCA CCATGCTCGC GGCGGCGCTG
CGCGACGGAA CCGCGCATCG TCCGTGCGTG TTCGAGGTCT TCGCGCGGCG GCTGCCCGCG
GGCCGTCGGT ACGGCGTGGT GGCGGGGACC GCCCGCGTGC TCGAGGCGCT GCAACGATTC
CGGTTCGGGC CCGCCGAGCT CGCGGTGGCC GAGCGGTTCC TCGACGCCGA TACGCTGGCG
TGGCTCCGCG ATTTCCGGTT CACCGGCGAG ATCGACGGCT ACCGCGAGGG TGAGTTGTAC
TTCCCCGGCT CCCCGATCCT CACCGTGCGC GCGAGCTTCG CGGAGGGCGT GATCCTGGAG
ACGCTGATCC TGTCGATCCT CAACCACGAC AGCGCGATCG CCTCCGCGGC GGCCCGCATG
GTCTCGGCGG CCGCCGGCCG CCCGCTGATC GAGATGGGAT CGCGGCGCAC CCACGAACAG
GCGGCGGTCG CCGCGGCTCG CGCCGCCTAC TTGGCCGGGT TCACCACCAC CTCGAACATG
GAGGCGGCCC GCACCTACGG CGTCCCGTCG GGCGGTACGG CGGCGCACGC GTTCACCCTG
CTGCACACCG GCCCGGACGG TCCCGACGAA GAGGCCGCGT TCGCCGCCCA GGTGGCCGCG
CAGGGCCCGG GCACCACGCT GCTGGTGGAC ACCTACGACA TCACCGAAGG TGTGAACCGC
GCGGTCCGTG CCGCGGGTCC GGAACTGGGC GGCGTACGGA TCGACTCGGG CGACCTGGGC
ATCATCACCC GGCAGGTGCG CACGCAGCTC GACGAACTGG GCGCCCGGAA CACCAAAATC
GTGGTCTCCG GCGATCTGGA CGAGTACGCG ATCGGCGCGC TGCGCGCCGA GCCGATCGAC
GTCTACGGTG TGGGCACTTC GGTGGTCACC GGCTCGGGCG CGCCGACCGC GGGCATGGTC
TACAAGCTGG TGCAGGTGGA CGGTATCCCG GTGGCCAAGC GGAGCTCGCA CAAGGAGACT
GTCGGCGGCG AGAAGCGGTC CCTGCGGCTG GCTCGGAGCA CCGGCACGAT CGTCGAGGAG
GTGCCGTACC CGGCCGGATC GATGCCGGCG GTGCCCGCAC ACTTGACAGC GACCGAACTG
CAGATCCCGC TGGTCCGCGG CGGCGACACG GTTCCGGGCC TCCCGGGCCT GGAGCAGGCC
CGGACGCACC TGCAGAGGGC GATGGTGACG CTGCCGTGGG AGGGCCTGGG CCTCTCGCAC
GGCGAGCCCG CGATCGCCAC CCGGTTCGAC GCACAGGCGC GCCGATGA
 
Protein sequence
MTVDDTARSK NTLSDSSGRA PGSSALLTDQ YELTMLAAAL RDGTAHRPCV FEVFARRLPA 
GRRYGVVAGT ARVLEALQRF RFGPAELAVA ERFLDADTLA WLRDFRFTGE IDGYREGELY
FPGSPILTVR ASFAEGVILE TLILSILNHD SAIASAAARM VSAAAGRPLI EMGSRRTHEQ
AAVAAARAAY LAGFTTTSNM EAARTYGVPS GGTAAHAFTL LHTGPDGPDE EAAFAAQVAA
QGPGTTLLVD TYDITEGVNR AVRAAGPELG GVRIDSGDLG IITRQVRTQL DELGARNTKI
VVSGDLDEYA IGALRAEPID VYGVGTSVVT GSGAPTAGMV YKLVQVDGIP VAKRSSHKET
VGGEKRSLRL ARSTGTIVEE VPYPAGSMPA VPAHLTATEL QIPLVRGGDT VPGLPGLEQA
RTHLQRAMVT LPWEGLGLSH GEPAIATRFD AQARR