Gene Tpau_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1285 
Symbol 
ID9155429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1326768 
End bp1327340 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content67% 
IMG OID 
Productisochorismatase hydrolase 
Protein accessionYP_003646254 
Protein GI296139011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.935011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCG GGGGCGCCGG CGAGCGCAGC GATGCCCTCA TCGTCGTGGA CGTGCAGAAC 
GACTTCTGCG AGGGTGGTTC GCTCGCGGTA ACGGGTGGTG CGCAGGTGGC CCGACGCATC
CACGACGATC TGCTGGAGCG CTACCCGACG ATCGTCGCGA CGCGGGACTG GCACATCGAT
CCCGGAGCGC ATTTCTCGGC GACACCCGAC TTCGTGGACT CATGGCCCGT GCACTGCCGA
GCGCGCACCG AGGGCGCACA ATTCCACCCG AATCTGCGTC TTCCGCTGCG AGTCCCGGTG
TTCAGTAAGG GGGCGTACTC GGCCGCCTAT TCGGGTTTCG AAGCGCACGA CCCCGACGGG
GCATCACTCG CGGAATGGCT TGTTGCACAT AACATATCGT CCATCGATGT GGTCGGGATC
GCCACCGACT ACTGCGTACG CGCCACAGCC CTCGACGCCC GGGCGGCAGG GCTGGCGGTT
CGCGTACTCG GCGACTACAC CGCGGGCGTG GCGCAGGAGT CCACCCGCGC TGCGCTCGCC
GAGTTCTCGG CCGCGGGCAT CACCGTGGCG TGA
 
Protein sequence
MNTGGAGERS DALIVVDVQN DFCEGGSLAV TGGAQVARRI HDDLLERYPT IVATRDWHID 
PGAHFSATPD FVDSWPVHCR ARTEGAQFHP NLRLPLRVPV FSKGAYSAAY SGFEAHDPDG
ASLAEWLVAH NISSIDVVGI ATDYCVRATA LDARAAGLAV RVLGDYTAGV AQESTRAALA
EFSAAGITVA