| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1278 |
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| Symbol | |
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| ID | 9155422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 1317113 |
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| End bp | 1319317 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | 1,4-alpha-glucan branching enzyme |
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| Protein accession | YP_003646247 |
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| Protein GI | 296139004 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACG ATCCCGCCCA GCAGAATTCG CCGGCAGCGT CCGTGGACCC CGAAGCCCGG
GCCCGCCTGC TCACCGGGCG CTATCACGAT CCGCACGCCA TCCTCGGCGC CCATCCGACG
GCCCGCGGCA CGGTGCTGCG CGCACTCAAG CCCGGTGCCA CCGCCGTGTC CGCGGTGATC
GGCGGCGAGC GGTACCCGCT GGCCCGGATC GATGGGGCAC TGTGGGGCAC CGAGGTGCCG
ATCACCGATC TCGTGGACTA CCGCTACGAG GTGCTTTACC CGGCCGGCAC GATGACCGTG
GCGGACGGCT ACCGGTTCCT GCCCACGGTG GGCGAGATGG ACCAGCACCT CATCTCCGAA
GGACGGCATG AGCGGCTCTG GGACGTGCTC GGTGCACACC TGCGCAGCTA CACCACCCCG
GACGGTGAGG TGACCGGCAC CTCGTTCGCG GTGTGGGCCC CGAACGCCAA TGGGGTCACC
GTGATCGGCG ACTTCGAGTA CTGGGCGGGC GAGTCGTACC CGATGCGCAC GCTGGGCTCG
TCCGGGGTGT GGGAGGTATT CGTCCCGGGC GTCGCCGACG GTGCGGCCTA CAAGTTCCGG
ATCTTCACCG ACAACGGCCC CGTGGAGAAG GCCGATCCGA TGGCCCGGCG TACCGAAGTG
CCCCCGGCCA CCGCCTCGAT CGTCACCCAC AGCACGCACG AGTGGCGCGA TGCCTCGTGG
ATGGCCGAAC GCGCCAAGCG ATCCCCCACC GACCGGCCCA TGAGCACCTA CGAGGTGCAC
CTCGGATCCT GGCGGCAAGG GTTGAGCTAC CTCGACCTCG CCACCGAGCT GGCGGACTAC
GTGACCGAGA CCGGCTTCAC CCACGTGGAA CTGCTCCCGG TGGCCGAGCA TCCGTTCGGC
GGGTCGTGGG GATACCAGGT GACCTCGTAC TACGCGCCCA CTTCTCGGTT CGGCACTCCG
GATGAGTTCC GTGAGTTCGT CGACGTGCTG CATCGGCGCG GCATCGGCGT GATCGTGGAC
TGGGTGCCGG CGCACTTCCC CAAGGACGCC TGGGCGCTGG CCCGGTTCGA CGGCACGCCG
CTGTACGAGC ACGGTGATCC GCAGCGCGGC GAGCAATTGG ACTGGGGCAC CTACGTCTTC
GACTTCGGCC GACGCGAGGT CCGGAATTTC CTGGTGGCCA ACGCCCTCTA CTGGTTCGAC
GAGTTCCACG TGGACGGACT GCGCGTCGAT GCGGTGGCCT CGATGCTGTA CCTGGACTAC
TCGCGGCCCG ACGGCGGCTG GACCCCCAAC GTGTACGGCG GCCGGGAGAA CCTCGAAGCG
GTCGAGTTCT TGCAGGAGAT GAACGCAACA GTGCACAAGC TGTTCCCGGG TGTCGTCACC
GTGGCGGAGG AGTCCACCAG CTGGCCCGGA GTCACTCGCC GCACCGATCT CGGCGGGCTC
GGCTTCACGA TGAAGTGGAA CATGGGGTGG ATGCACGACA CCCTGGGGTA TCTGGGGCGT
GATCAGGTGC ACCGGTCCTT CCACCACCAC GAGGTGACCT TCTCGCTGAT GTACGCGTGG
AGCGAGAACT TCGTACTGCC GATCAGCCAC GACGAAGTGG TACACGGCAA GGGCACGTTG
TGGACGCGGA TGCCCGGCGA CGCCCACACC AAGGCCGCGG GCGTACGCGC GTTGCTGGCC
TACATGTGGG GCCATCCCGG CAAGCAGTTG CTGTTCATGG GGCAGGAGTT CGGCCAGGTC
CGGGAGTGGT CCGAGGAGCG TTCACTGGAT TGGGACTGTA TGGACGGCTG GGAGGGCGAG
CTGCACAGCG GCATCCGATC GCTGACGCGG GACCTCAATG CCGCCTACCG CTCCCATCCG
GCGTTGTGGA GTCAGGACAC CACCCCGTCC GGGTACGAGT GGGTGGATGC GAACGACTCG
CAGAACAACG TTCTCAGCTT CCTGCGCTGG GGCAGTGACG GTTCCGTCGT GCTGTGCCTG
TACAACTTCT CCGGGCAGAC GCACGAGCGG TACCGGGTGG GCGTCCCCTT CCCGGGTTCG
TGGCGTGAGA TCCTCAACAC CGATTCCGCG GAGTACTCGG GCTCCGGTGC CGGCAACATG
GGCGGCGTGA GCGCGGAATC TCGTTCCTGG CATGGCCGTC CGGCGTCGAC CGAGGTGGTC
CTGGGTCCCA ACTCGGCTGT CTGGCTCACT TTCGACGGTG CGTGA
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| Protein sequence | MTDDPAQQNS PAASVDPEAR ARLLTGRYHD PHAILGAHPT ARGTVLRALK PGATAVSAVI
GGERYPLARI DGALWGTEVP ITDLVDYRYE VLYPAGTMTV ADGYRFLPTV GEMDQHLISE
GRHERLWDVL GAHLRSYTTP DGEVTGTSFA VWAPNANGVT VIGDFEYWAG ESYPMRTLGS
SGVWEVFVPG VADGAAYKFR IFTDNGPVEK ADPMARRTEV PPATASIVTH STHEWRDASW
MAERAKRSPT DRPMSTYEVH LGSWRQGLSY LDLATELADY VTETGFTHVE LLPVAEHPFG
GSWGYQVTSY YAPTSRFGTP DEFREFVDVL HRRGIGVIVD WVPAHFPKDA WALARFDGTP
LYEHGDPQRG EQLDWGTYVF DFGRREVRNF LVANALYWFD EFHVDGLRVD AVASMLYLDY
SRPDGGWTPN VYGGRENLEA VEFLQEMNAT VHKLFPGVVT VAEESTSWPG VTRRTDLGGL
GFTMKWNMGW MHDTLGYLGR DQVHRSFHHH EVTFSLMYAW SENFVLPISH DEVVHGKGTL
WTRMPGDAHT KAAGVRALLA YMWGHPGKQL LFMGQEFGQV REWSEERSLD WDCMDGWEGE
LHSGIRSLTR DLNAAYRSHP ALWSQDTTPS GYEWVDANDS QNNVLSFLRW GSDGSVVLCL
YNFSGQTHER YRVGVPFPGS WREILNTDSA EYSGSGAGNM GGVSAESRSW HGRPASTEVV
LGPNSAVWLT FDGA
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