Gene Tpau_1277 details

Gene Information

• Locus tag: Tpau_1277
• ID: 9155421
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 1316385
• End bp: 1317113
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 74%
• Product: beta-lactamase domain protein
• Protein accession: YP_003646246
• Protein GI: 296139003

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCGAGC TGGAGCGGGG CGTGTGGTTC GGAGCCGGGA CGCATGTCAA CTTCCTCGCG 
CTGGTCGACG GCGATGATGT GACTCTCATC GACGCCGGTT GGACCGGCGA TGCCGACCGG 
GTCGAGGCCG AGCTGGCGTC GATCGGCCGA CGGCCGCAGG ACGTACGGGC GATCCTGGTG 
ACGCACGCGC ACATCGATCA CGTGGGCGGC GCCGCGGCAC TCCACGAGCG GCACGGCATC 
CCCGTGCTGG CGCACCCGGA CGAACTGGCG CACGCCCGGG GAGAGACACA CGAGCAGGCA 
ACGCCGCTGG ACATCCTGCC GATCGCCTGG CGCCCACGCA CGCTGCGCTG GATGGCCGAT 
GTGGCGCGCG TCGGAGTGCT GAGCCACGTC GCGATGCCGT ACGCACAGGC CTTCTCCCCC 
GGCTCGGACA CCGCGCTCGA TCTGCCCGGC GCACCGATGC CGGTGGCCTG CCCGGGCCAC 
ACCTCGGGTC ACACCGCGTT CGCACTCCCC GGCGGGGTGG TGGCCACGGG CGACGCCCTG 
GTGACCGGCC ACCCGCTCTC GGCGACGACG GGGCCGCAAC TGCTCCCGGA GTTCTTCAGC 
CACGACGTGC CGCGCACGAT CGCGACGCTC GACGCGATCG CGACGCTCGA CGCCGGCCTC 
CTCGCCCCCG GTCACGGTGC GCCGTGGCGC GGGAGTCCCG CCGAGGCGGT GGCCCGGGCC 
CGCGGCTAA 

 

Protein sequence

MRELERGVWF GAGTHVNFLA LVDGDDVTLI DAGWTGDADR VEAELASIGR RPQDVRAILV 
THAHIDHVGG AAALHERHGI PVLAHPDELA HARGETHEQA TPLDILPIAW RPRTLRWMAD 
VARVGVLSHV AMPYAQAFSP GSDTALDLPG APMPVACPGH TSGHTAFALP GGVVATGDAL 
VTGHPLSATT GPQLLPEFFS HDVPRTIATL DAIATLDAGL LAPGHGAPWR GSPAEAVARA 
RG